Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003473-TA|BGIBMGA003473-PA|IPR001091|Site-specific
DNA-methyltransferase (cytosine-N4-specific)
(1210 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 66 2e-11
SPBC1734.07c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 59 3e-09
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 30 1.7
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 29 5.2
SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase |Schizos... 28 6.9
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 28 6.9
SPBC16G5.19 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 6.9
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 28 6.9
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 9.1
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 28 9.1
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 66.5 bits (155), Expect = 2e-11
Identities = 61/276 (22%), Positives = 120/276 (43%), Gaps = 20/276 (7%)
Query: 344 DIEAIKKFLQEYASKALLPYIEKQISQLSESVANRKG-VSRSLLSATKRWFGTGKGGNAT 402
++E +KKF+Q ++ P++++ + E + + G ++ LL A+K+++ ++
Sbjct: 365 EVEGMKKFVQTMLYDSIYPFMQRCVRAWEEDLTPQYGNLTTRLLFASKKYWSRNHSSHSQ 424
Query: 403 GNS---AVVYTNDCPELQLRRLGDLWFLCGQWQRAFDTYHTAKREFYADSAWLCYAGALE 459
GN +++Y+++ E R++ D F+ ++RA++ Y + F D AW A E
Sbjct: 425 GNYDPLSLIYSSEKQESIKRKMADFSFMLRDYKRAYEIYDEIRNTFSQDKAWNYLASCEE 484
Query: 460 MAAISAFMAGD--SNRKTHGYL----EESIVTYLNTCRMVQYAVRATLLSVICLTSSGLH 513
+ I M S + YL +E + Y Y R+ L++ + L+
Sbjct: 485 IQIICLLMQNRNISLKSQISYLNKWFDEMVYIYAVRLHSFYYTFRSVLVTSLLLSLKPAF 544
Query: 514 G--EAAKQLIRMTSED----SDLRSAMLLEQAALCFLS----GPGTKAMCRKYAFHMVLA 563
AA L ++ + ++ L A + + G RK AF +
Sbjct: 545 SIDFAASWLAKILEPGPISLNPFETSFLNTTIAGMYSNKEHVGVTDGNRRRKAAFWFAYS 604
Query: 564 GHRFSKAGQKKHAYRCYKQAHQVYSGSGWRLATDHV 599
+ G K A C+ A++VYS SGW ++H+
Sbjct: 605 AGFWRDCGHCKMAEICWNLANRVYSKSGWESLSEHM 640
Score = 37.9 bits (84), Expect = 0.009
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 11/131 (8%)
Query: 134 SDHEFTKHFLSCIIVGTTDDENVVDTFNGLNQQYAQLQNVMPPKLPKWFNNCILKTYLLL 193
++HE H + C+IV T+ + N + T L + ++ N P + + IL YL +
Sbjct: 195 AEHETFSHPVGCLIVITSHNTNPMATVMRL---FKEINNA---PFPNFISKEILHYYLFI 248
Query: 194 HDVSVVSKERADAVFDTLKHAFGPNSCFMLPINSKSTSDANVPADLWS----QYIKRSPD 249
HD + +F ++ + G NS F + + S S + D + Q +K +P
Sbjct: 249 HDEDNNDLSNSKQIFQQMRRSLGANSHF-IRLRSNYISAKPLDTDRYDTSSIQSLKNAPR 307
Query: 250 STSDVASIFSN 260
+ + S S+
Sbjct: 308 DSMESESFCSS 318
>SPBC1734.07c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 59.3 bits (137), Expect = 3e-09
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 332 STEVHGAALNNNDIEAIKKFLQEYASKALLPYIEKQISQLSESVAN-RKGVSRSLLSATK 390
+T+ L +D E++++ A ++ Y++K + + A+ R+G++ LL A++
Sbjct: 307 NTDTEIRLLFESDNESLRRLSSHIAFNGIVSYLDKCVRAWDDQYASPRRGITGKLLFASR 366
Query: 391 RWFGTGKGGNATGN--SAVVYTNDCPELQLRRLGDLWFLCGQWQRAFDTYHTAKREFYAD 448
++ + + S+ Y PE LR+L D F+ + A Y A R++ D
Sbjct: 367 KYLSSSNASTNSNYFPSSNAYRPFSPEAYLRKLADYSFMLRDYSHANQIYEIASRQYEND 426
Query: 449 SAWLCYAGALEMAAIS--------AFMAGDSNRKTHGYLEESIVTYLN-TCRMVQYAVRA 499
A L A +LEM I+ +M+ + + + Y++ +++ YLN + +A R
Sbjct: 427 GACLYSAASLEMIVITEHILHLKMPYMSLTNTLRINEYMQSAMLNYLNKSFNSYYHAARC 486
Query: 500 TLL 502
LL
Sbjct: 487 FLL 489
Score = 33.5 bits (73), Expect = 0.18
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 15/235 (6%)
Query: 12 IQSSFSPIVAVLCSQKVENIVSKNNVT--FPELLQPFCN-LDWEGQFREPGGNTCVIKNM 68
IQ +++P V+VLCS+ + + F ELL PF + + + R G ++N+
Sbjct: 50 IQEAYAPRVSVLCSRDADEFAMRKGYPKGFWELLYPFGDRIRGKVNRRGMNGEMLTLENL 109
Query: 69 KLIVRDVNWKPLQPTEARRQLNNAVLYNYNDKTISVEL-AGRSFLIPQSTHWFDAWRETY 127
L ++ +EA +VL +S E + SF + AW +
Sbjct: 110 NLHFVPIDALESHLSEASFPSLRSVLCERYPGLVSPEPPSDYSFGVHYKNVERWAWTLAH 169
Query: 128 L-DVQFPSDHEFTKHFLSCIIVGTTDDEN-------VVDTFNGLN-QQYAQLQNVMPP-K 177
+ Q P + + L+ I + + + VV + N + L N +P
Sbjct: 170 EGNYQMPLP-VYVRQLLTGIPITPFETFSHPVAHLVVVTSHNPSPFESLRSLINSIPYLS 228
Query: 178 LPKWFNNCILKTYLLLHDVSVVSKERADAVFDTLKHAFGPNSCFMLPINSKSTSD 232
LP + N I ++ +HD E + A+FDT+K FG F+ + K+T D
Sbjct: 229 LPAFVFNDINYLFVYVHDEDQHDLELSMAIFDTMKQTFGDCGYFLRLHSQKATLD 283
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 208 FDTLKHAFGPNS-CFMLPINSKSTSDANVPAD-----LWSQYIKRSPDSTSDVASIFSNL 261
+D L+H C ++ IN K A +PAD LW + K + + VA + +N
Sbjct: 311 YDFLRHVERAKMLCLVIDINPK----AKIPADQAFQLLWDELNKYEKNLINKVALVIANK 366
Query: 262 ATTPAEQAPIFPSQNIIER 280
A T AEQ + + I+ER
Sbjct: 367 ADTAAEQ-DLLLLKAIVER 384
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 798 AQGVEVASNVIVGQKLPSVVLEGDSKKSLIFSLTPMKVGQVYIQGLAYKLIN 849
A+ V V +G + VL G K ++ +TP+ +G + G+ +LIN
Sbjct: 405 AKSVNPDEAVAIGAAIQGGVLSGHVKDLVLLDVTPLSLGIETLGGVFTRLIN 456
>SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 239 LWSQYIKRSPDSTSDVASIFSNLATTPAEQAPIFPSQNIIERGEDTLTGSVQESVHPLTS 298
L + +I SPD T +ASI + E A + +I++ D ++ E HP +
Sbjct: 227 LMAAHIAESPDCTESLASIKEDKLKKSVEMA-LSSVHEVIQKTADRISALGVEEYHPAYA 285
Query: 299 PETDVYDNANSL 310
E + ++ NS+
Sbjct: 286 -ELCIVNSQNSI 296
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 1045 VLVTDNNPPLPLDENESKLDVTENKKNIKKDNVVMFKMEHSKQINHDFNERRLCI 1099
V++ DNN P + N KL + ++ ++ +N + + I+ N LC+
Sbjct: 85 VVIIDNNTPKKEESNAEKLKLDKDSSSVNYENQISKPLITFSDIHETVNVPFLCL 139
>SPBC16G5.19 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 105
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 116 STHWFDAWRETYLDVQFPSDHEFTKHF 142
STH + W +++L +QF + F HF
Sbjct: 79 STHVYSLWAKSFLIIQFENVDPFVDHF 105
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 231 SDANVPADLWSQYIKRSPDSTSDVASIFS 259
S+AN PADLW Q PD T D +I+S
Sbjct: 110 SEANSPADLWEQEAIVIPDIT-DKETIYS 137
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 475 THGYLEESIVTYLNTCRMVQYAVRATLLSVICLTSSGLHGE 515
T G LEE+ Y NT ++ +L S ICL G+HG+
Sbjct: 557 TPGLLEEA---YFNTFVFRAFSKNESLTSQICLYHIGIHGK 594
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 742 HPLVPQGEPIQISVTLWNPLKISLILKDVELLW 774
HP V P+ +S+T W I D +L+W
Sbjct: 249 HPSVSLNSPLDLSMTRWVFKAIKTFFPDFKLMW 281
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.132 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,450,764
Number of Sequences: 5004
Number of extensions: 235834
Number of successful extensions: 628
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 616
Number of HSP's gapped (non-prelim): 14
length of query: 1210
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1129
effective length of database: 1,957,154
effective search space: 2209626866
effective search space used: 2209626866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -