GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003473-TA|BGIBMGA003473-PA|IPR001091|Site-specific
DNA-methyltransferase (cytosine-N4-specific)
         (1210 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    27   3.9  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    25   9.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   9.1  
AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione S-tran...    25   9.1  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
            binding protein protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 18/65 (27%), Positives = 24/65 (36%)

Query: 1133 LGWTGALHNGPDADSKEIGVSIHLEKFETRRVQVQGVCAAPGTYLVGSAFTVTTQGTEPH 1192
            +G T  L N      KEIG  +  +      V   G    P    V S FT+    + PH
Sbjct: 65   IGCTNMLKNPRCRSVKEIGAQVGFQAALNSAVAAIGKLVEPIVAEVRSGFTLLQTASTPH 124

Query: 1193 MNVTD 1197
               +D
Sbjct: 125  NRNSD 129


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
            protein.
          Length = 415

 Score = 25.4 bits (53), Expect = 9.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 1179 GSAFTVTTQGTEPHMNVTDVSNNTSL 1204
            GSA T+T++G     N+ D+S  T L
Sbjct: 337  GSAVTITSEGQRFQCNLCDMSYRTKL 362


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 9.1
 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 7/126 (5%)

Query: 229  STSDANVPADLWSQYIKRSPDSTSDVASIFSNLATTPAEQAPIFPSQ---NIIERGEDTL 285
            S   A  PA+L     +RSP   +  A   +  ATT A  AP   +      + +G DT 
Sbjct: 1145 SDGGAGSPAELSGNRERRSPSIPNSNAGAATPTATTAAPLAPTTGNSKGGGGVVQG-DTA 1203

Query: 286  TGSVQESVHPLTSPETDVYDNANSLQTHXXXXXXXXXXXXAKGID---LSTEVHGAALNN 342
            T   + ++    +P T   D   S                A G +     T +HGA+   
Sbjct: 1204 TALDEVALPAPPAPPTSKRDRRTSGPAVSDAATEGAGGGGAAGAENGKKGTLLHGASERK 1263

Query: 343  NDIEAI 348
             + E++
Sbjct: 1264 GEAESV 1269


>AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione
           S-transferase S1-2 protein.
          Length = 195

 Score = 25.4 bits (53), Expect = 9.1
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 50  DWEGQFREPGGNTCVIKNMKLIVRDVNWKPLQPTEARR--QLNNAVLYNYNDKTISVELA 107
           DWE    +   +T  + + +L +  V+++P    + ++   LNN V+  Y +K   +   
Sbjct: 74  DWENLMIDTVVDT--VNDFRLKIAVVSYEPDDEIKEKKLVTLNNEVIPFYLEKLDDIARD 131

Query: 108 GRSFLIPQSTHWFDAWRETYLD 129
              +L      W D +    LD
Sbjct: 132 NNGYLANSKLSWADIYFTAILD 153


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.132    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,206,469
Number of Sequences: 2123
Number of extensions: 50264
Number of successful extensions: 140
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 136
Number of HSP's gapped (non-prelim): 6
length of query: 1210
length of database: 516,269
effective HSP length: 72
effective length of query: 1138
effective length of database: 363,413
effective search space: 413563994
effective search space used: 413563994
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)