Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003473-TA|BGIBMGA003473-PA|IPR001091|Site-specific
DNA-methyltransferase (cytosine-N4-specific)
(1210 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3186|AAF49132.2| 1319|Drosophila melanogaster CG8793-PA... 648 0.0
AY058679-1|AAL13908.1| 539|Drosophila melanogaster LD38816p pro... 114 6e-25
AY118283-1|AAM48312.1| 1527|Drosophila melanogaster AT14886p pro... 34 1.4
AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-P... 34 1.4
BT001729-1|AAN71484.1| 379|Drosophila melanogaster RE70417p pro... 33 2.4
AE013599-857|AAF58942.2| 379|Drosophila melanogaster CG8804-PB,... 33 2.4
AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA... 33 3.2
>AE014296-3186|AAF49132.2| 1319|Drosophila melanogaster CG8793-PA
protein.
Length = 1319
Score = 648 bits (1602), Expect = 0.0
Identities = 360/949 (37%), Positives = 539/949 (56%), Gaps = 30/949 (3%)
Query: 8 AQEFIQSSFSPIVAVLCSQKVENIVSKNNVTFPELLQPFCNLDWEGQFREPGGNTCVIKN 67
A++ I++ FSP++ VL S + + I +NN++F ELLQPF L + FR+ G + ++
Sbjct: 11 ARDIIRNIFSPLIGVLSSPQADEICHRNNLSFVELLQPFAKLPNDAHFRDVSGTSVSVRG 70
Query: 68 MKLIVRDVNWKPLQPTEARRQLNNAVLYNYNDKTISVELAGRSFLIPQSTHWFDAWRETY 127
++L DV+W+P Q AR+ LN +V +NDKT +AG +P S WF+ WRET+
Sbjct: 71 LRLNFCDVDWRPPQTILARKMLNESVTNAHNDKTRLATIAGIDLELPTSEPWFEQWRETF 130
Query: 128 LDVQFPSDHEFTKHFLSCIIVGTTDDENVVDTFNGLNQQYAQLQNVMPPKLPKWFNNC-I 186
L VQFP+DHEFT+H LSC++V ++ D +V+T + L Q+ Q+Q++ P KLPKWF+ +
Sbjct: 131 LTVQFPADHEFTRHLLSCLLVLSSADPQIVETAHKLGQRVQQMQSITPQKLPKWFHPTEV 190
Query: 187 LKTYLLLHDVSVVSKERADAVFDTLKHAFGPNSCFMLPINSKSTSDANVPADLWSQYIKR 246
L +Y++LH+ S +A F+ LK FG + CF++ INS + A D W+ +IKR
Sbjct: 191 LNSYVVLHEASQGDLSKAQQGFELLKSTFGDSKCFLVSINSMDSQGAAEVPDHWATFIKR 250
Query: 247 SPDSTSDVASIFSNLATTPAEQAPIFPSQNIIERGEDTLTGSVQES----VHPLTSPETD 302
P S ++ S + +P E + S ++ + S Q+S +HPL+ +
Sbjct: 251 QPKSDPNLPSTDLSAPKSPQEAVSVI-SMPAMQMSQLLEGVSAQDSDLAMLHPLSPMQES 309
Query: 303 VYDNANS-LQTHXXXXXXXXXXXXAKGIDLSTEV-HGAALNNNDIEAIKKFLQEYASKAL 360
+ NS G +L + HG L + DI+ ++ F+Q+YA +AL
Sbjct: 310 ATEAINSKFSISSESIASQTINPNVWGNELEADAPHGGCLTSRDIDNLRHFVQDYAVRAL 369
Query: 361 LPYIEKQISQLSESVANRKGVSRSLLSATKRWFGTGK-GGNATGNSAVVYTNDCPELQLR 419
+PYIE ++ L+E V N+KGVS+SLLSATKRWF T K G A +AV+YTN+ ELQ R
Sbjct: 370 IPYIEHLVAILAEGVTNKKGVSKSLLSATKRWFVTSKPGAGANNQNAVIYTNESAELQTR 429
Query: 420 RLGDLWFLCGQWQRAFDTYHTAKREFYADSAWLCYAGALEMAAISAFMAGDSNRKTHGYL 479
+LGDL+F+ G + AF +YH AKR+F ADSAW YAGALEMAA+SAFM G + RKT+ Y+
Sbjct: 430 KLGDLYFMFGHYNLAFQSYHQAKRDFNADSAWQYYAGALEMAALSAFMLGTAQRKTYDYM 489
Query: 480 EESIVTYLNTCRMVQYAVRATLLSVICLTSSGLHGEAAKQLIRMTSEDSDLRSAMLLEQA 539
E++IV YL C++ Q+A RATLLS+ CL ++ L+ E AKQLIRMT+E+SDLRSA+LLEQA
Sbjct: 490 EDAIVCYLTVCKLQQFATRATLLSMECLKTARLYSEVAKQLIRMTNEESDLRSALLLEQA 549
Query: 540 ALCFLSGPGTKAMCRKYAFHMVLAGHRFSKAGQKKHAYRCYKQAHQVYSGSGWRLATDHV 599
A CFL M RKYAFH+VLAG+R+S+AGQ+KHAYRCY+QA+QV+ W LA DH+
Sbjct: 550 AYCFL--VTQPPMHRKYAFHIVLAGNRYSRAGQRKHAYRCYRQAYQVFQKREWSLAEDHI 607
Query: 600 QFXXXXXXXXXXXXHDAVXXXXXXXXXXXXXXXXXXEAFLREYMHAHQQWQXXXXXXXXX 659
Q+ +A +FL+EY+ Q Q
Sbjct: 608 QYTVAKQAYMLKQLEEASRSFAHLLRPGSLQSAQQQTSFLKEYI----QTQNELVKRSPE 663
Query: 660 LEKLP--LPVAEVSMTRVACAGPAPLSSPRRCGATSLSVQAPRRDPHEERVWRTLEEMLV 717
L LP LP S RV +P + AT++ + + +E +W +EEMLV
Sbjct: 664 LGLLPHALPQVVQSSVRVLTLVQSPSAVAPHVPATNIDINS--NLTADEPIWNKIEEMLV 721
Query: 718 QVARGAVPMIFKPTLDLYDDTTDC--HPLVPQGEPIQISVTLWNPLKISLILKDVELLWR 775
A P +FKP+ LY P+ QGEPI+++VTL N ++ + L +++LLW+
Sbjct: 722 ITAANNKPFVFKPSRYLYTKQQPALETPVAVQGEPIELAVTLSNSVQCRIALSEIDLLWK 781
Query: 776 FTPLNESGDSDDNNSIYNEIALAQGVEVASNVIVGQKLPSVVLEGDSKKSLIFSLTPMKV 835
T N+ S N Y E + + I + S+ L ++++L F LTP
Sbjct: 782 LTLDNDEVLS--NACTYEESSDSANKIAVGAAIKTSCMASIKLAEQAEETLHFKLTPKLT 839
Query: 836 GQVYIQGLAYKLINAGEGASENSTGV------SIQGKVDLMSGVKSMDKRLEITVIPEAP 889
G++ I G+ + + AG + + G I+ S MD RL I ++P+ P
Sbjct: 840 GRLSILGVVCR-VAAGADPAASLLGTLQFETQKIRPHNAKQSSQTVMDNRLTIKLVPQLP 898
Query: 890 CLQMTFSETNPDIISGEIRTVDVELTNVGPVDMKNVFIAVSHPECVSVV 938
+ ++F+ +++GEI V V L N+G ++ +++ +P CVS++
Sbjct: 899 AMNVSFTPVPNRLLAGEIVPVHVTLRNMGIAPIEEIYLGCDNPRCVSLL 947
>AY058679-1|AAL13908.1| 539|Drosophila melanogaster LD38816p
protein.
Length = 539
Score = 114 bits (275), Expect = 6e-25
Identities = 87/312 (27%), Positives = 148/312 (47%), Gaps = 19/312 (6%)
Query: 637 AFLREYMHAHQQWQXXXXXXXXXLEKLP--LPVAEVSMTRVACAGPAPLSSPRRCGATSL 694
+FL+EY+ Q Q L LP LP S RV +P + AT++
Sbjct: 29 SFLKEYI----QTQNELVKRSPELGLLPHALPQVVQSSVRVLTLVQSPSAVAPHVPATNI 84
Query: 695 SVQAPRRDPHEERVWRTLEEMLVQVARGAVPMIFKPTLDLYDDTTDC--HPLVPQGEPIQ 752
+ + +E +W +EEMLV A P +FKP+ LY P+ QGEPI+
Sbjct: 85 DINSNLTA--DEPIWNKIEEMLVITAANNKPFVFKPSRYLYTKQQPALETPVAVQGEPIE 142
Query: 753 ISVTLWNPLKISLILKDVELLWRFTPLNESGDSDDNNSIYNEIALAQGVEVASNVIVGQK 812
++VTL N ++ + L +++LLW+ T N+ S N Y E + + I
Sbjct: 143 LAVTLSNSVQCRIALSEIDLLWKLTLDNDEVLS--NACTYEESSDSANKIAVGAAIKTSC 200
Query: 813 LPSVVLEGDSKKSLIFSLTPMKVGQVYIQGLAYKLINAGEGASENSTGV------SIQGK 866
+ S+ L ++++L F LTP G++ I G+ + + AG + + G I+
Sbjct: 201 MASIKLAEQAEETLHFKLTPKLTGRLSILGVVCR-VAAGADPAASLLGTLQFETQKIRPH 259
Query: 867 VDLMSGVKSMDKRLEITVIPEAPCLQMTFSETNPDIISGEIRTVDVELTNVGPVDMKNVF 926
S MD RL I ++P+ P + ++F+ +++GEI V V L N+G ++ ++
Sbjct: 260 NAKQSSQTVMDNRLTIKLVPQLPAMNVSFTPVPNRLLAGEIVPVHVTLRNMGIAPIEEIY 319
Query: 927 IAVSHPECVSVV 938
+ +P CVS++
Sbjct: 320 LGCDNPRCVSLL 331
>AY118283-1|AAM48312.1| 1527|Drosophila melanogaster AT14886p protein.
Length = 1527
Score = 33.9 bits (74), Expect = 1.4
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 956 REITPNSGHPDSIADITSPPYSKFMIDKKSSFIDSADNTFNQDIEKRSGLLQSMFVLR-- 1013
+E P DSI+ + PP KF++D++ D F+ + L + F L
Sbjct: 1178 KEAPPTQRKHDSISSVQQPPTKKFLVDQEEVEAFECDQDFDCQQAAQKMHLNNNFYLGDF 1237
Query: 1014 WKAQDETTGRSAVGQH 1029
K DETT R H
Sbjct: 1238 GKYADETTARDEDEPH 1253
>AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-PA
protein.
Length = 1602
Score = 33.9 bits (74), Expect = 1.4
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 956 REITPNSGHPDSIADITSPPYSKFMIDKKSSFIDSADNTFNQDIEKRSGLLQSMFVLR-- 1013
+E P DSI+ + PP KF++D++ D F+ + L + F L
Sbjct: 1253 KEAPPTQRKHDSISSVQQPPTKKFLVDQEEVEAFECDQDFDCQQAAQKMHLNNNFYLGDF 1312
Query: 1014 WKAQDETTGRSAVGQH 1029
K DETT R H
Sbjct: 1313 GKYADETTARDEDEPH 1328
>BT001729-1|AAN71484.1| 379|Drosophila melanogaster RE70417p protein.
Length = 379
Score = 33.1 bits (72), Expect = 2.4
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 1081 KMEHSKQINHDFNERRLCIIPVTLSIVNCYGVPVRVFINMSKQKNRG 1127
+ +H+ I D N+R LC + + + I+ C G P+ +F + + RG
Sbjct: 71 QQQHTATITMDTNKRILCRVGLDVLILLCAGFPILLFFLLGEPYKRG 117
>AE013599-857|AAF58942.2| 379|Drosophila melanogaster CG8804-PB,
isoform B protein.
Length = 379
Score = 33.1 bits (72), Expect = 2.4
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 1081 KMEHSKQINHDFNERRLCIIPVTLSIVNCYGVPVRVFINMSKQKNRG 1127
+ +H+ I D N+R LC + + + I+ C G P+ +F + + RG
Sbjct: 71 QQQHTATITMDTNKRILCRVGLDVLILLCAGFPILLFFLLGEPYKRG 117
>AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA
protein.
Length = 660
Score = 32.7 bits (71), Expect = 3.2
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Query: 185 CILKTYLLLHDVSVVS--KERADAVFDTLKHAFGPNSCFMLPINSKSTSDANVPADLWSQ 242
C+ YL+ + V+ + R F ++ + P + + STS + A S+
Sbjct: 8 CVCAWYLIAFRANRVNLIRHRLPTCFIAMEASSNPTTPTTAVATTTSTSSPSPAASTSSK 67
Query: 243 YIKRSPDSTSDVASIFSNLATTPAEQAPIFPSQNI-----IERGEDTLTGSVQESVHPLT 297
+S +++ ++ S L TT E N+ + G+ +L+G+ S P+
Sbjct: 68 GHSQSATASASASATQSQLLTTSLEMPKTEDLYNLSVASGLSEGQRSLSGAPSASSSPIM 127
Query: 298 SPETDVYD-NAN 308
SP+ ++ NAN
Sbjct: 128 SPQGKIFGRNAN 139
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.317 0.132 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,587,885
Number of Sequences: 52641
Number of extensions: 2442591
Number of successful extensions: 5387
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5372
Number of HSP's gapped (non-prelim): 9
length of query: 1210
length of database: 24,830,863
effective HSP length: 93
effective length of query: 1117
effective length of database: 19,935,250
effective search space: 22267674250
effective search space used: 22267674250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 67 (31.1 bits)
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