Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003468-TA|BGIBMGA003468-PA|IPR007087|Zinc finger,
C2H2-type
(667 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 32 0.013
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 32 0.013
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 32 0.013
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 27 0.50
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 27 0.50
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 26 1.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 25 1.5
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 25 1.5
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 25 1.5
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 25 1.5
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 25 1.5
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 25 1.5
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 25 1.5
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 25 1.5
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 25 1.5
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 25 1.5
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 25 1.5
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 25 1.5
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 25 1.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 1.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 6.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 6.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 6.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 6.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 6.1
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 6.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 8.1
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 8.1
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 32.3 bits (70), Expect = 0.013
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 564 KGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEE 623
+GK+ EE +DE+KKK TT + S ++D D +D G+ + +D N +E
Sbjct: 118 RGKKSLEEILDEIKKK---TTRFQD-SRSKDVYLIDYPEDYGKRVLSMDGYQNILDKKDE 173
Query: 624 DLDRYEK 630
L +EK
Sbjct: 174 LLGEWEK 180
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.013
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 564 KGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEE 623
+GK+ EE +DE+KKK TT + S ++D D +D G+ + +D N +E
Sbjct: 118 RGKKSLEEILDEIKKK---TTRFQD-SRSKDVYLIDYPEDYGKRVLSMDGYQNILDKKDE 173
Query: 624 DLDRYEK 630
L +EK
Sbjct: 174 LLGEWEK 180
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.013
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 564 KGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEE 623
+GK+ EE +DE+KKK TT + S ++D D +D G+ + +D N +E
Sbjct: 118 RGKKSLEEILDEIKKK---TTRFQD-SRSKDVYLIDYPEDYGKRVLSMDGYQNILDKKDE 173
Query: 624 DLDRYEK 630
L +EK
Sbjct: 174 LLGEWEK 180
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.1 bits (57), Expect = 0.50
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 55 RYNSGGRSYNTSRDRVDESYK--KTYRN-ESSVNYSNREYGGRGGSPERK 101
R + R Y+ SR+R +SYK + YR + +R+ GRG S E +
Sbjct: 279 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRGRGRSREHR 328
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 27.1 bits (57), Expect = 0.50
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 51 NNDTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNY 86
+N YN+ +YN + + +YKK Y N +NY
Sbjct: 325 SNYNNYNNNYNNYNNYNNNYNNNYKKLYYN---INY 357
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.8 bits (54), Expect = 1.1
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 60 GRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPER--KRMRMERVMYRDQPK-D 116
G+ N RD + E+ + R E SV+ + YG + E K + R RDQ + D
Sbjct: 1038 GKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSD 1097
Query: 117 VAMTAAAVITAGPTAQGRKITEAKGGPSV 145
+ +TA A + A P +
Sbjct: 1098 DKTKETSTVTAAAAATNIRPGTADNKPQL 1126
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 31 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 78
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 31 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 78
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 31 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 78
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 31 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 78
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 31 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 78
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 31 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 78
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 31 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 78
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 280 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 327
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 280 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 327
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 280 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 327
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 280 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 327
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 280 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 327
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 280 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 327
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.5
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 55 RYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNREYGGRGGSPERKRMRMERVMYRD 112
R + R Y+ SR+R +SYK NE REY R S ER R R ER R+
Sbjct: 280 RERTSRRRYSRSREREQKSYK----NEREY----REY--RETSRERSRDRRERGRSRE 327
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 6.1
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 51 NNDTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNY 86
+N T +N+ YN + + + + KK Y N +NY
Sbjct: 86 SNKTIHNNNNYKYNYNNNNYNNNCKKLYYN---INY 118
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 6.1
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 51 NNDTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNY 86
+N T +N+ YN + + + + KK Y N +NY
Sbjct: 86 SNKTIHNNNNYKYNYNNNNYNNNCKKLYYN---INY 118
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 6.1
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 51 NNDTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNY 86
+N T +N+ YN + + + + KK Y N +NY
Sbjct: 86 SNKTIHNNNNYKYNYNNNNYNNNCKKLYYN---INY 118
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.4 bits (48), Expect = 6.1
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 408 ICSLEHLKKKANKSLRHASPKAEGSGDEGM 437
+ L H K N+ + H + + +G EG+
Sbjct: 397 LSDLHHPNCKINRKVHHTTSSSSAAGGEGL 426
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.4 bits (48), Expect = 6.1
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 51 NNDTRYNSGGRSYNTSRDRVDESYKKTYRN 80
NN+ N+ +YN + +YKK Y N
Sbjct: 326 NNNYNNNNYNNNYNNYNNNNYNNYKKLYYN 355
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.4 bits (48), Expect = 6.1
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 530 YRDTRTLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEET 572
Y +LR H HRQ H + + + + + +E++E +
Sbjct: 42 YSSLNSLRNHKSIYHRQ-HSKNEQQRKEMEQMREREREQREHS 83
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.0 bits (47), Expect = 8.1
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 51 NNDTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNY 86
+N T +N+ YN + + + + KK Y N +NY
Sbjct: 86 SNRTIHNNNNYKYNYNNNNYNNNCKKLYYN---INY 118
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.0 bits (47), Expect = 8.1
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 573 IDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLD 626
I+ KK D E + + GE + EVD ++ DD++D D
Sbjct: 351 IERPKKDEDEEEEEEVVVVGRNGAGVGAMNANGEAVGEVDEDDDDDGDDDDDDD 404
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.312 0.127 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,921
Number of Sequences: 429
Number of extensions: 6800
Number of successful extensions: 48
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 29
length of query: 667
length of database: 140,377
effective HSP length: 62
effective length of query: 605
effective length of database: 113,779
effective search space: 68836295
effective search space used: 68836295
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)
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