GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003458-TA|BGIBMGA003458-PA|undefined
         (712 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   2.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   3.7  

>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 320 PRHFMIHSRVNIEMTDPEIRGGIDGFVLGSAITSVLGTFSSLRLSQLLD--MYYTPRNGI 377
           P+H +I +  N+ MT      G D     + I +V    +S    +L+D  M Y P +GI
Sbjct: 280 PKHMLIEAYTNLSMTMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLIDNWMTYMPPSGI 339


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 320 PRHFMIHSRVNIEMTDPEIRGGIDGFVLGSAITSVLGTFSSLRLSQLLD--MYYTPRNGI 377
           P+H +I +  N+ MT      G D     + I +V    +S    +L+D  M Y P +GI
Sbjct: 280 PKHMLIEAYTNLSMTMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLVDNWMTYMPPSGI 339


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,003
Number of Sequences: 429
Number of extensions: 7341
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 2
length of query: 712
length of database: 140,377
effective HSP length: 63
effective length of query: 649
effective length of database: 113,350
effective search space: 73564150
effective search space used: 73564150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)