GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003451-TA|BGIBMGA003451-PA|IPR008145|Guanylate
kinase/L-type calcium channel region, IPR003593|AAA ATPase,
IPR008144|Guanylate kinase
         (207 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.52 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   6.3  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
          protein.
          Length = 411

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 51 NGVHYHFTNLNDMSTAIEKGEFIE 74
          N + Y+F N N  +T I  G++IE
Sbjct: 25 NVIEYNFPNDNIRNTLISNGDYIE 48


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 34  FGFSVSHTTRAPRAGEKNGVHYHFTNL 60
           +GF+V+ T +      K GV   F N+
Sbjct: 535 YGFNVNATKQIKDEANKKGVSLRFYNV 561


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.135    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,057
Number of Sequences: 429
Number of extensions: 2542
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 207
length of database: 140,377
effective HSP length: 55
effective length of query: 152
effective length of database: 116,782
effective search space: 17750864
effective search space used: 17750864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)