GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003438-TA|BGIBMGA003438-PA|IPR011498|Kelch,
IPR006652|Kelch repeat, IPR011043|Galactose oxidase, central
         (493 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    27   0.36 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    26   0.82 

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 27.1 bits (57), Expect = 0.36
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 105  YNTVSNV-WRQLKAPGAPPPRSAHQA 129
            Y+T+    WRQ + P  PPP S+ QA
Sbjct: 1342 YSTLERTAWRQQQPPPPPPPPSSGQA 1367


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.8 bits (54), Expect = 0.82
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 5/67 (7%)

Query: 42  KVIAEIEREEAKRYAASEKVLEKPPSSR----AYATLTPHPINNELVLFGGEYHNGQKTE 97
           K+I    R  +KR+++S      P SSR    +  T  PH  +N+       +H  Q TE
Sbjct: 15  KIIRSRSRRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQDHNK-EKSKNNHHCNQDTE 73

Query: 98  TYNDLFI 104
             N L I
Sbjct: 74  KLNQLEI 80


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.133    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,305
Number of Sequences: 429
Number of extensions: 5414
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 2
length of query: 493
length of database: 140,377
effective HSP length: 60
effective length of query: 433
effective length of database: 114,637
effective search space: 49637821
effective search space used: 49637821
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)