Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003429-TA|BGIBMGA003429-PA|IPR014021|Helicase
superfamily 1 and 2 ATP-binding, IPR001650|Helicase, C-terminal,
IPR000629|ATP-dependent helicase, DEAD-box, IPR014014|DEAD-box RNA
helicase Q motif, IPR011545|DEAD/DEAH box helicase, N-terminal,
IPR014001|DEAD-like helicases, N-terminal
(812 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 292 9e-81
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 26 1.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 26 1.4
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 24 5.7
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 9.9
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 9.9
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 292 bits (716), Expect = 9e-81
Identities = 168/447 (37%), Positives = 251/447 (56%), Gaps = 26/447 (5%)
Query: 368 EDYNITLKGGKIPNPIRSWKEAPLHTDIMDIINKVGYKSPTPIQRQAIPIGLQNRDIIGV 427
++ + + G +P PI S++ A L ++D I K GYK PTP+Q+ A+PI + RD++
Sbjct: 180 DNIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMAC 239
Query: 428 AETGSGKTLAFLIPLLTWIQSLPKSERMEDADQGPYAIILAPTRELAQQIEEETNKFGIP 487
A+TGSGKT AF +P++ + + P +I++PTREL QI ++ KF +
Sbjct: 240 AQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLN 299
Query: 488 LGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVLDNRYLVLNRCTYVVLDEADRM 547
+ +VV GG S Q KL GC I++ATPGRL+D ++ + + ++VLDEADRM
Sbjct: 300 SILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRM 359
Query: 548 IDMGFEPDVQKILEYMPVSNIKPDSDAAEDASVLLANYNTKKKYRQTVMFTATMPPAVER 607
+DMGF P ++K++++ + V L RQT+MF+AT P V+
Sbjct: 360 LDMGFLPSIEKMVDH--------------ETMVPLGE-------RQTLMFSATFPDEVQH 398
Query: 608 LARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEILQR----GVEPPIIIFV 663
LAR +L + +G VG EQ Y + N+K+ L EIL+R G ++FV
Sbjct: 399 LARRFLNNYLFLAVGIVGGACSDVEQNFYEVARNKKKDLLKEILERENDSGTLGGTLVFV 458
Query: 664 NQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIK 723
KK AD +A L + + ++HG + Q QR+ ALA K G ILVAT VA RG+DIK
Sbjct: 459 EMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARGLDIK 518
Query: 724 DVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFV-TKEDSALFYDLKQVLLASSVST 782
+VS VINYD+ K I++Y HRIGRTGR G G+A SF +ED+ L DL ++L ++ S
Sbjct: 519 NVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRATSFFDPEEDAPLRGDLVRILKQANQSV 578
Query: 783 CPPELMNHPEAQHKPGTVVTKKRREEM 809
+ + PG ++K E++
Sbjct: 579 PDWMMGGNANRNFMPGRGISKFGGEDV 605
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 1.4
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 216 AYSDRREPKKDNEETSKTKDKER-EEEAIKA-RYLGIVKKKRRVRRLNDRKFVFDWDASE 273
+Y + RE +K ETSK + ++R E E K + + + + N+ ++ + +
Sbjct: 49 SYKNEREYRK-YRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNN 107
Query: 274 DTSNDYNVLYK 284
+ +N+Y LYK
Sbjct: 108 NYNNNYKKLYK 118
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 1.4
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 216 AYSDRREPKKDNEETSKTKDKER-EEEAIKA-RYLGIVKKKRRVRRLNDRKFVFDWDASE 273
+Y + RE +K ETSK + ++R E E K + + + + N+ ++ + +
Sbjct: 49 SYKNEREYRK-YRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNN 107
Query: 274 DTSNDYNVLYK 284
+ +N+Y LYK
Sbjct: 108 NYNNNYKKLYK 118
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.8 bits (49), Expect = 5.7
Identities = 14/71 (19%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 716 AGRGIDIKD--VSMVINYDMAKTIEDYTHRIGRTGRAGKTG-KAMSFVTKEDSALFYDLK 772
+GR +++ D + +I+ D T + ++ + + K + +V K D+ + ++LK
Sbjct: 63 SGRPVEVDDDLIKAIIDSDRHSTTREIAEKLHVSHTCIENHLKQLGYVQKLDTWVPHELK 122
Query: 773 QVLLASSVSTC 783
+ L +++C
Sbjct: 123 EKHLTQRINSC 133
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 271 ASEDTSNDYNVLYKERHQVQFFGRGHIAGIDIKSQKKDHSKFY 313
++ + ++ V+Y+ +H FG IKS + DH+K Y
Sbjct: 29 SANNLAHSMKVIYEWKHIDFDFGSDERRDAAIKSGEFDHTKNY 71
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 9.9
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 611 SYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEILQ 652
++L+ I +GS +P R M+G+ R+LT++ +
Sbjct: 388 THLKVSGINRVGSTRRPSRRNSCESQMMGDEMSLRELTQVTE 429
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.135 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,707
Number of Sequences: 429
Number of extensions: 8229
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 7
length of query: 812
length of database: 140,377
effective HSP length: 63
effective length of query: 749
effective length of database: 113,350
effective search space: 84899150
effective search space used: 84899150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)
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