GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003400-TA|BGIBMGA003400-PA|undefined
         (94 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   3.4  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   3.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   3.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   3.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   3.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   7.7  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 54 TTSVTXXXXGKDLKLQINSELKPIKPLHK 82
          + SV     G   + + N +LKP  P HK
Sbjct: 42 SNSVHGHREGLGRRHRYNFQLKPYNPEHK 70


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 54 TTSVTXXXXGKDLKLQINSELKPIKPLHK 82
          + SV     G   + + N +LKP  P HK
Sbjct: 43 SNSVHGHREGLGRRHRYNFQLKPYNPEHK 71


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 67  KLQINSELKPIKPLHKNVLDL 87
           +L +N  L+P  P  K VLD+
Sbjct: 274 RLLMNDILRPYVPEFKGVLDV 294


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 67  KLQINSELKPIKPLHKNVLDL 87
           +L +N  L+P  P  K VLD+
Sbjct: 189 RLLMNDILRPYVPEFKGVLDV 209


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 67  KLQINSELKPIKPLHKNVLDL 87
           +L +N  L+P  P  K VLD+
Sbjct: 508 RLLMNDILRPYVPEFKGVLDV 528


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.4 bits (38), Expect = 7.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 68  LQINSELKPIKPLHKNVLDLTVKS 91
           L +  +  P+K   +  L+LTV++
Sbjct: 396 LSVQPQANPVKGFEEYFLNLTVEN 419


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.132    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,303
Number of Sequences: 429
Number of extensions: 628
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 94
length of database: 140,377
effective HSP length: 49
effective length of query: 45
effective length of database: 119,356
effective search space:  5371020
effective search space used:  5371020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)
S2: 38 (19.4 bits)