GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003398-TA|BGIBMGA003398-PA|IPR004023|Mago nashi protein
         (146 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   1.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   1.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   5.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.9  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    20   9.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    20   9.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   9.2  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 16  KFGHEFLEFEFRPDGKLRYANNSNYK 41
           K+  EFL  +   D +LRY+N S Y+
Sbjct: 106 KYEVEFLLQQQWYDPRLRYSNRSQYE 131


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 16  KFGHEFLEFEFRPDGKLRYANNSNYK 41
           K+  EFL  +   D +LRY+N S Y+
Sbjct: 106 KYEVEFLLQQQWYDPRLRYSNRSQYE 131


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 16  KFGHEFLEFEFRPDGKLRYANNSNYK 41
           K+  EFL  +   D +LRY+N S Y+
Sbjct: 157 KYEVEFLLQQQWYDPRLRYSNRSQYE 182


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 16  KFGHEFLEFEFRPDGKLRYANNSNYK 41
           K+  EFL  +   D +LRY+N S Y+
Sbjct: 106 KYEVEFLLQQQWYDPRLRYSNRSQYE 131


>AF388659-2|AAK71994.1|  463|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform B
          protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 10/37 (27%), Positives = 20/37 (54%)

Query: 56 VMDELKRIIIDSEIMHEDDRLWPQPDRVGRQELEIVI 92
          +M+++    I+ + +HE D L     RVG +   I++
Sbjct: 39 LMEQILLAKIEKQNLHESDDLHESDGRVGGKRRNILL 75



 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 51  YVHPCVMD 58
           + HPCVMD
Sbjct: 254 FEHPCVMD 261


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 35  ANNSNYKNDTMIRKEAY 51
           +N SNY ND    K+ Y
Sbjct: 91  SNISNYNNDNNYNKKLY 107


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 62  RIIIDSEIMHEDDRLWPQPD 81
           +I I +  +H D  ++P PD
Sbjct: 395 KIWIPAFAIHRDSAIYPNPD 414


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 78  PQPDRVGRQELEIVIGEEHISFTTSKTGSLVDVNQSRDPE 117
           P+   +G++ + +   EE+      KT   V  +  ++PE
Sbjct: 99  PEEVVIGKEIVAVCRNEEYTGDDCQKTYQYVQCHYKQNPE 138


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 51  YVHPCVMD 58
           + HPCVMD
Sbjct: 339 FEHPCVMD 346


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 51  YVHPCVMD 58
           + HPCVMD
Sbjct: 573 FEHPCVMD 580


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.143    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,486
Number of Sequences: 429
Number of extensions: 2140
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 146
length of database: 140,377
effective HSP length: 52
effective length of query: 94
effective length of database: 118,069
effective search space: 11098486
effective search space used: 11098486
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)