Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003393-TA|BGIBMGA003393-PA|undefined
(1781 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 30 0.15
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 30 0.19
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 29 0.45
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 27 1.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 1.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 1.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 1.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 1.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 1.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 27 1.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 27 1.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 27 1.4
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 25 4.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 4.2
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 4.2
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 25 5.5
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 25 5.5
AF393493-1|AAL60418.1| 142|Apis mellifera odorant binding prote... 25 5.5
AF166497-1|AAD51945.1| 142|Apis mellifera putative odorant-bind... 25 5.5
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 25 7.3
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 24 9.7
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 30.3 bits (65), Expect = 0.15
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1370 SSGNAEKV-ESKHETLSSSQNRETLVDPDLLKSNLE---VPNHKIKLPRNNELSDVSKVQ 1425
S GN K+ +SK +TL +S NR T + P + ++E + N+ I L R N +D +
Sbjct: 585 SLGNYYKIRDSKVKTLDASHNRITELSPLSVPDSVELLFINNNYINLVRPNTFTDKVNLT 644
Query: 1426 MMDL 1429
+D+
Sbjct: 645 RVDM 648
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 29.9 bits (64), Expect = 0.19
Identities = 53/246 (21%), Positives = 92/246 (37%), Gaps = 9/246 (3%)
Query: 1188 CTKRLSNLAKVLEEVRKNKSLVYSQISSS-DNTSGSEHRNEKMINSKSPPYTQSDEDNEL 1246
C S L + EEV K ++ +I + D + + ++ SK S N L
Sbjct: 425 CATEHSQLTNISEEVLKEAKIIQEEIRTLLDESIQRKSDITELDVSKRCKDLASFMGNLL 484
Query: 1247 QNNQVFLGTKSVSSKDTTISSTEYIPFLNDIPKPPPTSFDSGDTHLSVSPVVKLPVNFDS 1306
Q + K V + D S P L + + + P +++
Sbjct: 485 QETRTPGFGKDVLATDERSFSGSRNPLLQEHDSVMLGEISPHHEYYDSKSSTETPPSYNQ 544
Query: 1307 HLLSSLEVNIKTRAKPPPALSRIHLKHGNDHIIPHELSTVLEVDSPMSLKLKNQSNNKSE 1366
L + + ++KPP A +G+D I + + SP S K S
Sbjct: 545 -LNYNENIERFFKSKPPVATM-----YGSDEEIINSSNDEGGKTSPNSAVRKCMSPINGS 598
Query: 1367 IPVSSGNAEKVESKHETLSSSQNRETLVDPDLLKSNLEVPNHKIKLPRNNELSDVSKVQM 1426
SG+AE + S +SS +RE + ++S + L R+NE D+ K+ M
Sbjct: 599 GASGSGSAENLSSGSNNQTSSASRENTSNTTSMESFKPPTLTESLLNRHNE--DMEKLMM 656
Query: 1427 MDLKQF 1432
+ ++F
Sbjct: 657 LKHREF 662
Score = 24.6 bits (51), Expect = 7.3
Identities = 36/143 (25%), Positives = 48/143 (33%), Gaps = 12/143 (8%)
Query: 45 PKKLDLTKVRAREAASKLRRAKQEKLDEQKRI-------LDRKLQAREVANELSRDKTIK 97
P D+ +V S+L +E L E K I LD +Q + EL K K
Sbjct: 415 PANPDIFRVSCATEHSQLTNISEEVLKEAKIIQEEIRTLLDESIQRKSDITELDVSKRCK 474
Query: 98 ASKKPSETHLQSTEMEEPSKDAQPVAQEQEKPSRNDIATQWEMEEPSTELEHNIPTLTLM 157
LQ T KD + SRN + E S L P
Sbjct: 475 DLASFMGNLLQETRTPGFGKDVLATDERSFSGSRNPLL----QEHDSVMLGEISPHHEYY 530
Query: 158 DDK-DTPTELNNNMPQKSDNSKR 179
D K T T + N ++N +R
Sbjct: 531 DSKSSTETPPSYNQLNYNENIER 553
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 28.7 bits (61), Expect = 0.45
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 201 ERVSVKESVNIVSEFLRNRAMRLRETDHISSLNKSQC 237
+R S+KE++N+ EF N + ++ SS NK+ C
Sbjct: 635 QRASMKENLNVYPEFQENVQLCSEISESYSSNNKTLC 671
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 27.5 bits (58), Expect = 1.0
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 44 VPKKLDLTKVRAREAASKLR---RAKQEKLDEQKRILDRKLQAREVANELSRDKT----I 96
VPK+ + A + +S R +A +L++++R+L +QA + +RDK +
Sbjct: 143 VPKREKARILAAMQQSSHSRSQEKAVAAELEDEQRLLATVVQAHLDTCDFTRDKVAPILV 202
Query: 97 KASKKPSETHLQSTEMEEPSKDAQPVAQEQE 127
+A + P+ T T + + QP+ +QE
Sbjct: 203 RARETPNYTACPPTLACPLNPNPQPLTGQQE 233
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 1689 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGLFSNADD-LSSVKGTS 1747
D+ R + S + PSG R+ TP+ + T + +S S +G+ L ++ +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKELRFIT 409
Query: 1748 NSMKNHSASEKDDLL 1762
+ MK A E D+++
Sbjct: 410 DRMK--KADESDEII 422
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 1689 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGLFSNADD-LSSVKGTS 1747
D+ R + S + PSG R+ TP+ + T + +S S +G+ L ++ +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKELRFIT 409
Query: 1748 NSMKNHSASEKDDLL 1762
+ MK A E D+++
Sbjct: 410 DRMK--KADESDEII 422
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 1689 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGLFSNADD-LSSVKGTS 1747
D+ R + S + PSG R+ TP+ + T + +S S +G+ L ++ +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKELRFIT 409
Query: 1748 NSMKNHSASEKDDLL 1762
+ MK A E D+++
Sbjct: 410 DRMK--KADESDEII 422
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 1689 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGLFSNADD-LSSVKGTS 1747
D+ R + S + PSG R+ TP+ + T + +S S +G+ L ++ +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKELRFIT 409
Query: 1748 NSMKNHSASEKDDLL 1762
+ MK A E D+++
Sbjct: 410 DRMK--KADESDEII 422
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 1689 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGLFSNADD-LSSVKGTS 1747
D+ R + S + PSG R+ TP+ + T + +S S +G+ L ++ +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKELRFIT 409
Query: 1748 NSMKNHSASEKDDLL 1762
+ MK A E D+++
Sbjct: 410 DRMK--KADESDEII 422
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 1689 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGLFSNADD-LSSVKGTS 1747
D+ R + S + PSG R+ TP+ + T + +S S +G+ L ++ +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKELRFIT 409
Query: 1748 NSMKNHSASEKDDLL 1762
+ MK A E D+++
Sbjct: 410 DRMK--KADESDEII 422
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 1689 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGLFSNADD-LSSVKGTS 1747
D+ R + S + PSG R+ TP+ + T + +S S +G+ L ++ +
Sbjct: 418 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKELRFIT 477
Query: 1748 NSMKNHSASEKDDLL 1762
+ MK A E D+++
Sbjct: 478 DRMK--KADESDEII 490
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 1689 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGLFSNADD-LSSVKGTS 1747
D+ R + S + PSG R+ TP+ + T + +S S +G+ L ++ +
Sbjct: 418 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKELRFIT 477
Query: 1748 NSMKNHSASEKDDLL 1762
+ MK A E D+++
Sbjct: 478 DRMK--KADESDEII 490
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.4 bits (53), Expect = 4.2
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 61 KLRRAKQ-EKLDEQKRILDRKLQAREVANELSRDKTIKASKK-PSETHLQSTEMEE 114
+LRR ++ EKL + R R +R+ +N + KTI S K P + +TE+++
Sbjct: 65 ELRRIREIEKLGSE-RSKSRSPDSRDKSNTSNTSKTIILSDKGPEGIQINATELQK 119
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.4 bits (53), Expect = 4.2
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 61 KLRRAKQ-EKLDEQKRILDRKLQAREVANELSRDKTIKASKK-PSETHLQSTEMEE 114
+LRR ++ EKL + R R +R+ +N + KTI S K P + +TE+++
Sbjct: 65 ELRRIREIEKLGSE-RSKSRSPDSRDRSNTSNTSKTIILSNKGPEGIQINATELQK 119
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.4 bits (53), Expect = 4.2
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 63 RRAKQEKLDEQKRILDRKLQAREVANELSRDKTIKASKKPSETHLQSTEMEEPS 116
++ +Q++ +Q+R +R+L+ E+ E+ D+ E+ ST+ P+
Sbjct: 164 QQQQQQQQRQQQRQEERRLRPDEIKVEVGEDEFANGGAARDESKAGSTDASTPA 217
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 25.0 bits (52), Expect = 5.5
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 1159 QTVNEDLKYVKLAVDKLQNMEKIADLTEKCTKRLSNLAKVLEEVR 1203
Q NEDL + +A L+ E L E C L +VLE R
Sbjct: 101 QQWNEDLNWQPIATKYLRRYEDNIFLPEDCLLFTIELDRVLESPR 145
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 25.0 bits (52), Expect = 5.5
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 1159 QTVNEDLKYVKLAVDKLQNMEKIADLTEKCTKRLSNLAKVLEEVR 1203
Q NEDL + +A L+ E L E C L +VLE R
Sbjct: 116 QQWNEDLNWQPIATKYLRRYEDNIFLPEDCLLFTIELDRVLESPR 160
>AF393493-1|AAL60418.1| 142|Apis mellifera odorant binding protein
ASP2 protein.
Length = 142
Score = 25.0 bits (52), Expect = 5.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 1736 NADDLSSVKGTSNSMKNHSASEKDD 1760
NADD+ VKG +N ++ E D+
Sbjct: 101 NADDIQLVKGIANECIENAKGETDE 125
>AF166497-1|AAD51945.1| 142|Apis mellifera putative odorant-binding
protein ASP2 protein.
Length = 142
Score = 25.0 bits (52), Expect = 5.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 1736 NADDLSSVKGTSNSMKNHSASEKDD 1760
NADD+ VKG +N ++ E D+
Sbjct: 101 NADDIQLVKGIANECIENAKGETDE 125
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 24.6 bits (51), Expect = 7.3
Identities = 17/76 (22%), Positives = 31/76 (40%)
Query: 609 LEEKTESTEVKQNTKEIHLEPEAVAEDNAQSEREVSAVQHSNMDKSDAVTKASEINVNKD 668
+ E+ + E +Q + P + ++ E+S SN ++ V K +EI +K
Sbjct: 438 INEEKRTIENEQLNRMYKSYPNYIDKETKDMNLEISTRPKSNTVENACVLKNTEIFKDKS 497
Query: 669 DVFPVLPPDTVTEAGQ 684
D F + GQ
Sbjct: 498 DWFDYSEVSKWVQKGQ 513
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 24.2 bits (50), Expect = 9.7
Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 198 VNEERVSVKESVNIVSEFLRNRAMRLRE-TDHISSLNKSQCGDLV 241
VN+ +++ E + V EF RA+++ E +++ ++ G L+
Sbjct: 137 VNDVNMTITELTDPVKEFWERRALQISEGVEYVGNIRWELAGTLL 181
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.308 0.124 0.337
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,409
Number of Sequences: 429
Number of extensions: 22358
Number of successful extensions: 81
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 60
Number of HSP's gapped (non-prelim): 28
length of query: 1781
length of database: 140,377
effective HSP length: 68
effective length of query: 1713
effective length of database: 111,205
effective search space: 190494165
effective search space used: 190494165
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 50 (24.2 bits)
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