GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003390-TA|BGIBMGA003390-PA|IPR000182|GCN5-related
N-acetyltransferase
         (356 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    28   0.11 
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               25   1.00 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   5.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   5.3  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   7.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   9.3  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 28.3 bits (60), Expect = 0.11
 Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 216 TKYQKSELRLIESLEGVCDRILEYNIHKERSDSTRFAKGMSQ-TFKTLHGLVDKGVKVDL 274
           TKY K++++L+E + G+  ++++    + +S         +Q T    + +V +GV    
Sbjct: 238 TKYGKNQIKLLEIIHGLTKKVIQLKKEEYKSGKRNIIDNSAQKTESKTNNIVVEGVSFGQ 297

Query: 275 GIPLE 279
            + L+
Sbjct: 298 SVGLK 302


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 25.0 bits (52), Expect = 1.00
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 259 FKTLHGLVDKGVKVDLGIPLELWDKPSAEIT-HMKTQCESLLEEN 302
           F T HG++DK  +VD+   L    +   + T  +  +C+S+  E+
Sbjct: 62  FMTKHGILDKNAEVDVQKALRHLPRSMQDSTKKLFNKCKSIQNED 106


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 266  VDKGVKVDLGIPLELWDKPSAE 287
            +D   K+ LG+   LW +PS +
Sbjct: 1891 IDSLKKLKLGLRSSLWSRPSTQ 1912


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 266  VDKGVKVDLGIPLELWDKPSAE 287
            +D   K+ LG+   LW +PS +
Sbjct: 1887 IDSLKKLKLGLRSSLWSRPSTQ 1908


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 243 KERSDSTRFAKGMSQTFKTLHGLVDKG 269
           K + D ++F K      K LH ++D+G
Sbjct: 18  KAQDDISKFLKDRPYVQKQLHCILDRG 44


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 10/27 (37%), Positives = 12/27 (44%)

Query: 281 WDKPSAEITHMKTQCESLLEENEIAVE 307
           W KP   +   KTQ   L E N +  E
Sbjct: 37  WRKPKPAMVEEKTQLRYLEELNALRTE 63


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.133    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,176
Number of Sequences: 429
Number of extensions: 4424
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 6
length of query: 356
length of database: 140,377
effective HSP length: 58
effective length of query: 298
effective length of database: 115,495
effective search space: 34417510
effective search space used: 34417510
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 44 (21.8 bits)