Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003380-TA|BGIBMGA003380-PA|undefined
(631 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 1.9
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 23 5.7
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 23 5.7
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 23 5.7
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 23 5.7
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 23 5.7
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 23 5.7
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 23 5.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 5.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 5.7
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 7.6
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.0 bits (52), Expect = 1.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 583 STFTADHEELLRSSRSEQNETKPNDSV 609
+T EE++ SS E +T PN +V
Sbjct: 562 ATMYGSDEEIINSSNDEGGKTSPNSAV 588
Score = 23.8 bits (49), Expect = 4.3
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 18/131 (13%)
Query: 377 QPLMTFSQMVPQPMLQG-PQNQAMIASLQPQLQNQPVISSNSIQT--IYQSQSIPPVSS- 432
QPL + P P Q PQN A P++ P+I + + S + PV
Sbjct: 758 QPLSV--SIPPPPSAQNVPQNTNSQAI--PRIPILPMIPVYCVPVPQVNDSTILSPVREK 813
Query: 433 -FNNQPILAPTQNPYL----SXXXXXXXXXXXXTIMSMPSPSFLPALENQQPWLGSQESG 487
++QP+ P QNPY+ S ++ PS + +P+L +++
Sbjct: 814 LSSSQPMQPPQQNPYMFLPVSYMSTTMAGVIYPPVIGTPSTGMM-----YKPFLIPEQTS 868
Query: 488 YSSIQNLPIVN 498
S N P +N
Sbjct: 869 ISHENNQPTMN 879
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 583 STFTADHEELLRSSRSEQNET 603
+T + H+E R SRSE +ET
Sbjct: 5 TTNHSHHDERFRQSRSEDSET 25
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 583 STFTADHEELLRSSRSEQNET 603
+T + H+E R SRSE +ET
Sbjct: 5 TTNHSHHDERFRQSRSEDSET 25
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 583 STFTADHEELLRSSRSEQNET 603
+T + H+E R SRSE +ET
Sbjct: 5 TTNHSHHDERFRQSRSEDSET 25
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 583 STFTADHEELLRSSRSEQNET 603
+T + H+E R SRSE +ET
Sbjct: 5 TTNHSHHDERFRQSRSEDSET 25
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 583 STFTADHEELLRSSRSEQNET 603
+T + H+E R SRSE +ET
Sbjct: 5 TTNHSHHDERFRQSRSEDSET 25
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 583 STFTADHEELLRSSRSEQNET 603
+T + H+E R SRSE +ET
Sbjct: 5 TTNHSHHDERFRQSRSEDSET 25
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 583 STFTADHEELLRSSRSEQNET 603
+T + H+E R SRSE +ET
Sbjct: 5 TTNHSHHDERFRQSRSEDSET 25
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 583 STFTADHEELLRSSRSEQNET 603
+T + H+E R SRSE +ET
Sbjct: 5 TTNHSHHDERFRQSRSEDSET 25
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.4 bits (48), Expect = 5.7
Identities = 16/60 (26%), Positives = 20/60 (33%)
Query: 330 PNQSSTIPVSNKPIAIFPVXXXXXXXXXXHNQLLILPINTQATSIHSQPLMTFSQMVPQP 389
P +S V + I I N L P TS+H T SQ+ P P
Sbjct: 326 PESNSRCSVKREKIKISVSYPSTETLNTKCNTLERTPSKCSQTSVHYSNGQTHSQLCPTP 385
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.0 bits (47), Expect = 7.6
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 405 PQLQNQPVISSNSIQTIYQSQSIPPVSSFNNQPILAPTQN 444
P+L+ +P + + +Y Q PP +P P N
Sbjct: 114 PRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNN 153
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.311 0.127 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,261
Number of Sequences: 429
Number of extensions: 6498
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 12
length of query: 631
length of database: 140,377
effective HSP length: 62
effective length of query: 569
effective length of database: 113,779
effective search space: 64740251
effective search space used: 64740251
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 47 (23.0 bits)
- SilkBase 1999-2023 -