GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003365-TA|BGIBMGA003365-PA|IPR000357|HEAT
         (551 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    28   0.17 
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    25   1.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   2.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   2.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   2.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   6.6  

>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 303 VRALACTLLGTTRAVSDRFLLQTLDKQLMSNMKKKRTAHERGAELVRSGAWASGRRWADD 362
           +  LA TL+   RA  D F     DK+++ N+       +R    V+   +  G RW  D
Sbjct: 38  ILTLALTLVTLVRA-EDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQDADFCCGMRWPGD 96

Query: 363 APG 365
           A G
Sbjct: 97  ATG 99


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/45 (31%), Positives = 21/45 (46%)

Query: 220 AFQALLTLHQRGQILGSNLYEHVCVALSDDYEIVREVALKLIWVL 264
           A    LTL   GQ+L  +        L  +Y +V +  LK+I +L
Sbjct: 11  AVMTSLTLGPAGQVLAGSSSPRPKPLLKKEYPLVMDTKLKIIEIL 55


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 481 VASKTCLEMCIDKILENLKRYPQDKRSTFRCVQRLGSSHATLV 523
           + SK C EM  D  ++ +       R  + C++++G   A +V
Sbjct: 41  IYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADVV 83


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 481 VASKTCLEMCIDKILENLKRYPQDKRSTFRCVQRLGSSHATLV 523
           + SK C EM  D  ++ +       R  + C++++G   A +V
Sbjct: 41  IYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADVV 83


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 481 VASKTCLEMCIDKILENLKRYPQDKRSTFRCVQRLGSSHATLV 523
           + SK C EM  D  ++ +       R  + C++++G   A +V
Sbjct: 41  IYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEADVV 83


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 251 EIVREVALKLIWVLGNKYPENVITLQD 277
           EI+ E    + ++ G+K P N+I + D
Sbjct: 53  EIINETHENVKYLPGHKLPPNIIAIPD 79


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.135    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,786
Number of Sequences: 429
Number of extensions: 5365
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 6
length of query: 551
length of database: 140,377
effective HSP length: 61
effective length of query: 490
effective length of database: 114,208
effective search space: 55961920
effective search space used: 55961920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)