Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003348-TA|BGIBMGA003348-PA|IPR007854|Fip1
(364 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 31 0.012
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 29 0.083
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 29 0.083
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 29 0.083
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 29 0.083
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 29 0.083
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 29 0.083
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 29 0.083
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 29 0.083
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 29 0.083
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 29 0.083
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 29 0.083
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 29 0.083
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 29 0.083
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 29 0.083
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 7.2
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.012
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 240 NNYQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPF 296
N+Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 287 NSYRKYRETSKERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM 345
Query: 297 TGHGQAPG 304
GQ PG
Sbjct: 346 --RGQVPG 351
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 56 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 112
Query: 299 HGQAPG 304
GQ PG
Sbjct: 113 RGQVPG 118
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 56 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 112
Query: 299 HGQAPG 304
GQ PG
Sbjct: 113 RGQVPG 118
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 56 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 112
Query: 299 HGQAPG 304
GQ PG
Sbjct: 113 RGQVPG 118
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 56 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 112
Query: 299 HGQAPG 304
GQ PG
Sbjct: 113 RGQVPG 118
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 56 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 112
Query: 299 HGQAPG 304
GQ PG
Sbjct: 113 RGQVPG 118
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 56 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 112
Query: 299 HGQAPG 304
GQ PG
Sbjct: 113 RGQVPG 118
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 56 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 112
Query: 299 HGQAPG 304
GQ PG
Sbjct: 113 RGQVPG 118
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 305 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 361
Query: 299 HGQAPG 304
GQ PG
Sbjct: 362 RGQVPG 367
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 305 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 361
Query: 299 HGQAPG 304
GQ PG
Sbjct: 362 RGQVPG 367
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 305 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 361
Query: 299 HGQAPG 304
GQ PG
Sbjct: 362 RGQVPG 367
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 305 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 361
Query: 299 HGQAPG 304
GQ PG
Sbjct: 362 RGQVPG 367
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 305 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 361
Query: 299 HGQAPG 304
GQ PG
Sbjct: 362 RGQVPG 367
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 305 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 361
Query: 299 HGQAPG 304
GQ PG
Sbjct: 362 RGQVPG 367
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 28.7 bits (61), Expect = 0.083
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 242 YQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQ---PPHATYDEPWGSPFTG 298
Y+ T + + +RRE GR + P + P Y PP PW P
Sbjct: 305 YREYRETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPW-VPM-- 361
Query: 299 HGQAPG 304
GQ PG
Sbjct: 362 RGQVPG 367
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 7.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 300 GQAPGGWTPSD 310
G A GGW PSD
Sbjct: 567 GSALGGWHPSD 577
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.310 0.132 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,507
Number of Sequences: 429
Number of extensions: 4903
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 16
length of query: 364
length of database: 140,377
effective HSP length: 59
effective length of query: 305
effective length of database: 115,066
effective search space: 35095130
effective search space used: 35095130
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 44 (21.8 bits)
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