GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003339-TA|BGIBMGA003339-PA|IPR000326|Phosphoesterase,
PA-phosphatase related, IPR008934|Acid phosphatase/vanadium-dependent
haloperoxidase
         (108 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   0.81 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   0.81 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   7.5  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    19   9.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    19   9.9  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 0.81
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 30  IYFDSVSIIFYPPLMAWVVSVSISRVLAERHYLLDS 65
           + F ++   F P L+   V   IS V+A RH  L++
Sbjct: 199 VIFSAMGSFFLPMLVMLYVYGRISCVIASRHRNLEA 234


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 0.81
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 10  DKFSFPSGHASRAVLISFILIYFDSVSIIFYPPLMAW 46
           D F++PS  + R   +   +++  S S I +P ++ W
Sbjct: 150 DPFTYPSKMSRRRAAVLIAIVWICS-SAISFPAIVWW 185


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
          protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 11 KFSFPSGHASRAVLIS 26
          +F+FP+G+A  A + S
Sbjct: 34 EFAFPNGYAKLAAIKS 49


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 30  IYFDSVSIIFYP 41
           IY D VS  F+P
Sbjct: 357 IYIDKVSRFFFP 368


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)

Query: 37  IIFYPPLMAW 46
           +I +PPL+ W
Sbjct: 195 VICFPPLVGW 204


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.142    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,076
Number of Sequences: 429
Number of extensions: 622
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 108
length of database: 140,377
effective HSP length: 50
effective length of query: 58
effective length of database: 118,927
effective search space:  6897766
effective search space used:  6897766
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.7 bits)
S2: 38 (19.4 bits)