GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003328-TA|BGIBMGA003328-PA|IPR001283|Allergen V5/Tpx-1
related
         (214 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   0.94 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   5.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.8  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 118 NEYGENIFYAWSTDPAFTVSGRDPVDKWYSEINNHKFGREPTNLDSGHFSQVIWEE 173
           N Y    F+  S+   F VS R   D+  S+ + H+F   P   + GH +  + +E
Sbjct: 269 NGYRTLFFHPLSSRREFAVSTRILRDENLSQNSYHEFQILPERGELGHCTASVMDE 324


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 139 RDPVDKWYSEINNHKFGREPTNLDSGHFSQVIWEETREIGVGVAKSKEG 187
           ++ +D     + NH       +   G  S  +W+    +G+   K K+G
Sbjct: 413 QEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPK-KDG 460


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/35 (25%), Positives = 13/35 (37%)

Query: 97  KYAEEWAKALAKKGQTEHRDQNEYGENIFYAWSTD 131
           KY   W       G T H  + ++  + FY    D
Sbjct: 166 KYPNNWLSVFNGTGWTFHEGRKQFYFHQFYKQQPD 200


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.132    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,414
Number of Sequences: 429
Number of extensions: 2390
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 214
length of database: 140,377
effective HSP length: 55
effective length of query: 159
effective length of database: 116,782
effective search space: 18568338
effective search space used: 18568338
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 42 (21.0 bits)