Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003320-TA|BGIBMGA003320-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(614 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 41 3e-05
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 31 0.028
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 31 0.037
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 29 0.11
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 28 0.26
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 27 0.45
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 25 1.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 4.2
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 7.4
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 23 7.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 7.4
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 23 9.7
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 40.7 bits (91), Expect = 3e-05
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 403 RIARNNSKYVCTLCKRSFVTSTDLMVHETCH---DKYACYGCRNKYDTFEQLSNHTKTCT 459
RI + CT+C ++F+ S L++H H Y C C + +QL HT+T T
Sbjct: 168 RIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHT 227
Score = 35.9 bits (79), Expect = 0.001
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 17/168 (10%)
Query: 314 TQKNQLNVGEDSKNEFNFDNTDSLNHSPSPEVCVKHEPDSDNDDTEFMNEMPLECMLCMK 373
T ++V + D SL SP V S+ T + E +C+LC K
Sbjct: 11 TNSTTMSVKNEISTVEPVDPVKSLVCSPDLSVFTSPACGSETPLTN-IEEKTYQCLLCQK 69
Query: 374 LFSSVSELKGHVVA-----QHSY--------VSVKRRSDCTTRIARNNSKYVCTLCKRSF 420
F + + H+ + + Y +V R R Y C C +SF
Sbjct: 70 AFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSF 129
Query: 421 VTSTDLMVHETCHDK---YACYGCRNKYDTFEQLSNHTKTCTAVQSKK 465
+L VH H K Y C C ++ +L H + T + K
Sbjct: 130 SVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHK 177
Score = 35.9 bits (79), Expect = 0.001
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 14/109 (12%)
Query: 363 EMPLECMLCMKLFSSVSELKGHV---VAQHSYV--------SVKRRSDCTTRIARNNSKY 411
E P +C +C K F +L H+ + YV + ++ TR Y
Sbjct: 173 ERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPY 232
Query: 412 VCTLCKRSFVTSTDLMVHETCH--DK-YACYGCRNKYDTFEQLSNHTKT 457
C +C +SF + L +H+ H +K Y C C + + + + H KT
Sbjct: 233 TCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKT 281
Score = 32.3 bits (70), Expect = 0.012
Identities = 30/111 (27%), Positives = 40/111 (36%), Gaps = 14/111 (12%)
Query: 363 EMPLECMLCMKLFSSVSELKGHV---VAQHSY--------VSVKRRSDCTTRIARNNSKY 411
E P C +C K F+ + L H + Y SVK RI Y
Sbjct: 89 EDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPY 148
Query: 412 VCTLCKRSFVTSTDLMVHETCHD---KYACYGCRNKYDTFEQLSNHTKTCT 459
C +C+R+F S L H H + C C + QL H +T T
Sbjct: 149 KCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHT 199
Score = 23.4 bits (48), Expect = 5.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 411 YVCTLCKRSFVTSTDLMVHETCHDKYACYG 440
Y CTLC +F + + +H H + G
Sbjct: 260 YKCTLCHETFGSKKTMELHIKTHSDSSVVG 289
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 31.1 bits (67), Expect = 0.028
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 410 KYVCTLCKRSFVTSTDLMVH-ETCHDKYA----CYGCRNKYDTFEQLSNHTKTCTAVQSK 464
++ C C + + T L H + H + + C C+ Y + L NH SK
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSK 61
Query: 465 KQQQPKTLEDVKSTAKPPKTKAE 487
+QQ K +E ++ + + ++
Sbjct: 62 NEQQRKEMEQMREREREQREHSD 84
Score = 24.6 bits (51), Expect = 2.4
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 368 CMLCMKLFSSVSELKGHVVAQHSYVSVKRRSDCTTRIARNNSKYVCTLCKRSFVTSTDLM 427
C C K+ +S++ L+ H+ H+ R + + +C +CKR + + L
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHT---------------RPSKEPICNICKRVYSSLNSLR 49
Query: 428 VHETCHDKYACYGCRNKYDTFEQL-------SNHTKTCTAVQSKKQQQ 468
H++ + + + + + EQ+ H+ T+ Q ++QQQ
Sbjct: 50 NHKSIYHRQHSKNEQQRKE-MEQMREREREQREHSDRVTSQQQQQQQQ 96
Score = 23.0 bits (47), Expect = 7.4
Identities = 9/48 (18%), Positives = 26/48 (54%)
Query: 547 EHQKAFRERQKMKKIKNKRESNAALNAPSKTKKTQSEHCKEYQQKSRL 594
E Q+ E+ + ++ + + S+ + + ++ Q + ++ QQ+SR+
Sbjct: 63 EQQRKEMEQMREREREQREHSDRVTSQQQQQQQQQQQQDQQQQQQSRM 110
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 30.7 bits (66), Expect = 0.037
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 15/62 (24%)
Query: 368 CMLCMKLFSSVSELKGHVVAQHSYVSVKRRSDCTTRIARNNSKYVCTLCKRSFVTSTDLM 427
C LC K+ S + LK HV +H A +Y C +C+R + + LM
Sbjct: 8 CQLCGKVLCSKASLKRHVADKH---------------AERQEEYRCVICERVYCSRNSLM 52
Query: 428 VH 429
H
Sbjct: 53 TH 54
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 29.1 bits (62), Expect = 0.11
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 16/71 (22%)
Query: 361 MNEMPLECMLCMKLFSSVSELKGHVVAQHSYVSVKRRSDCTTRIARNNSKYVCTLCKRSF 420
+NE P EC C + FS LK H +H ++++ YVC C R +
Sbjct: 2 INE-PQECPYCRRNFSCYYSLKRHFQDKHE---------------QSDTLYVCEFCNRRY 45
Query: 421 VTSTDLMVHET 431
T L H++
Sbjct: 46 RTKNSLTTHKS 56
Score = 26.6 bits (56), Expect = 0.60
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 408 NSKYVCTLCKRSFVTSTDLMVH-ETCHDK----YACYGCRNKYDTFEQLSNH 454
N C C+R+F L H + H++ Y C C +Y T L+ H
Sbjct: 3 NEPQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 27.9 bits (59), Expect = 0.26
Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 20/85 (23%)
Query: 363 EMPLECMLCMKLFSSVSELKGHVVAQHSYVSVKRRSDCTTRIARNNSKYVCTLCKRSFVT 422
E P EC C K F+ LK H+ R+ Y C+ C R FV
Sbjct: 7 EKPFECPECHKRFTRDHHLKTHM-----------------RLHTGEKPYHCSHCDRQFVQ 49
Query: 423 STDLMVHETCHD---KYACYGCRNK 444
+L H H YAC C K
Sbjct: 50 VANLRRHLRVHTGERPYACELCAAK 74
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 27.1 bits (57), Expect = 0.45
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 423 STDLMVHETCHDKYACYGCRNKYDTFEQLSNHTKTCTAVQSKKQQQPKTLEDV 475
ST+ MV+ +K +N D+F +LS+HT + + QQ+ TL++V
Sbjct: 197 STNTMVYMV-DNKNTLIIYQNADDSFHRLSSHTLNHNSDKMSDQQENLTLKEV 248
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 25.4 bits (53), Expect = 1.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 364 MPLECMLCMKLFSSVSELKGHV 385
+P +C LC K FS L+GH+
Sbjct: 41 LPCKCHLCGKAFSRPWLLQGHI 62
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.8 bits (49), Expect = 4.2
Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 167 LNDRYNAMSNKNNWPKPIEVQKNIDSTV-LGESTTVEIKQEVISEDE 212
LND YN + +++ +E+ +NI + ++T ++ + +S +E
Sbjct: 394 LNDLYNVKNTLDSYNGSMEINQNIAQNIDHAKNTIIDYRNNDLSINE 440
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.0 bits (47), Expect = 7.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 352 DSDNDDTEFMNEMPLECML 370
D D+DD E N P E ML
Sbjct: 399 DDDDDDVEAANGKPAEGML 417
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 23.0 bits (47), Expect = 7.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 447 TFEQLSNHTKTCTAVQSKKQQQPKTLED 474
T E+L K V SKK PK L D
Sbjct: 2 TIEELKKTIKNLRKVCSKKNDTPKELLD 29
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.0 bits (47), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 368 CMLCMKLFSSVSELKGHVVAQH 389
C LC K+F +++ L H H
Sbjct: 404 CALCHKVFRTLNSLNNHKSIYH 425
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 22.6 bits (46), Expect = 9.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 65 FPFYTMLLNVKENAESLDNSCGKLECRACLENVEKANLIDI 105
F F +LL + E++ N LE R+ E +ID+
Sbjct: 17 FSFVVILLIIPSKCEAVSNDMQPLEARSADLVPEPRYIIDV 57
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.313 0.126 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,663
Number of Sequences: 429
Number of extensions: 6033
Number of successful extensions: 60
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 23
length of query: 614
length of database: 140,377
effective HSP length: 62
effective length of query: 552
effective length of database: 113,779
effective search space: 62806008
effective search space used: 62806008
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)
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