Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003318-TA|BGIBMGA003318-PA|IPR012178|DNA replication
factor C, large subunit, IPR001357|BRCT, IPR011304|L-lactate
dehydrogenase, IPR003959|AAA ATPase, central region, IPR013725|DNA
replication factor C-terminal, IPR003593|AAA ATPase
(1050 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 29 0.20
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 27 0.60
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 27 0.80
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 27 0.80
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 27 1.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 5.6
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 24 7.4
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 9.8
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 29.1 bits (62), Expect = 0.20
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 146 NNDKSHERKLQKEMKQKESIKLDKDSLPSLKDKEKKTDSYNVNNLKNKSIIDEVKEG 202
NN + + +EM++++S+ + D L + KD + + +N LK S++ K G
Sbjct: 386 NNLRGETQSNYREMEKRQSVPAN-DLLTTEKDNNEIVTAQFLNQLKKSSVLVHTKNG 441
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 27.5 bits (58), Expect = 0.60
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 548 GYFKAALLSGPP---GVGKTTTVSLVCRELGFDAVEFNASDTRNKSLLKEQIGELLATTS 604
G LL+G P G T +++ + G DA+EF S TRN + L +++
Sbjct: 552 GVLMFELLTGTPPFTGGDPMKTYNIILK--GIDAIEFPRSITRNATALIKKLCRDNPAER 609
Query: 605 LSGYAKGDTSK 615
L GY KG S+
Sbjct: 610 L-GYQKGGISE 619
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 27.1 bits (57), Expect = 0.80
Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 2/111 (1%)
Query: 74 NKSTAELKEVKPIDLFGNAPIIRTEPIVKKEKNKTELGIHSDDEFEKSLLEIDEIDHLEK 133
++ E E+ DL I R P K K + LGI +DD E+ L +K
Sbjct: 2 SEDEVESFEITDYDLENEFNINR--PRRKLSKKQQMLGIWADDSDEEELSARPSFKTFDK 59
Query: 134 NKNIDFTPLENGNNDKSHERKLQKEMKQKESIKLDKDSLPSLKDKEKKTDS 184
TP+ K ++E K+ + D +++ S K+ + S
Sbjct: 60 GPKNYTTPVNFVAGGIQQAGKPKEETDDKDDDESDNENIKSQKEFPNSSSS 110
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.1 bits (57), Expect = 0.80
Identities = 22/99 (22%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 117 EFEKSLLEIDEIDHLEKNKNIDF-TPLENGNNDKSHERKLQK-EMKQKESIKLDKDSLPS 174
E+ K + +++ H EK K ++ T + + + E+K K E + ++ + K+
Sbjct: 244 EYRKKDRQYEKL-HNEKEKFLEERTSHKRYSRSREREQKSYKNEREYRKYRETSKERFRD 302
Query: 175 LKDKEKKTDSYNVNNLKNKSI--IDEVKEGNKRKFSEFI 211
+++E+ +S +++L NK+I + K NK+ + I
Sbjct: 303 RRERERSKESKIISSLSNKTIHNNNNYKNYNKKLYYNII 341
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 26.6 bits (56), Expect = 1.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 167 LDKDSLPSLKDKEKKTDSYNVNNLKNKSIIDEVKEGNKRKFSEFIETNI 215
L+K L ++ E++ S +N KN +I+D K NKR ++ +++
Sbjct: 487 LNKTVLAVVRQSEEEAVSLLINFSKNNTIVDISKLVNKRNNAKIYTSSV 535
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.2 bits (50), Expect = 5.6
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 143 ENGNNDKSHERKLQKEMKQKESIKLDKDSLPSLKDKEKKTDSYNVNNLKNKSIIDEVKEG 202
E+ N+D SH E + ++ +D L +K + D+Y ++ + K + +G
Sbjct: 227 ESDNSDYSHTTD---ENRHSSTLDIDHKMLTPIKSEP--IDAYEMHQISKKKLSPATPKG 281
Query: 203 NK 204
+K
Sbjct: 282 SK 283
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 23.8 bits (49), Expect = 7.4
Identities = 14/69 (20%), Positives = 29/69 (42%)
Query: 96 RTEPIVKKEKNKTELGIHSDDEFEKSLLEIDEIDHLEKNKNIDFTPLENGNNDKSHERKL 155
R + IV + N ++ K L+ + +N NI T +N NN K++++
Sbjct: 382 RMQKIVNDDFNFDDVNFRILGANVKELIRNTHCVNNNQNDNIQNTNNQNDNNQKNNKKNA 441
Query: 156 QKEMKQKES 164
+ ++
Sbjct: 442 NNQKNNNQN 450
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.4 bits (48), Expect = 9.8
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 129 DHLEKNKNIDFTPLENGNNDKSHERKLQKEMKQKESIKLDKDSLPSLKDKEKKTDSYNVN 188
D+ NK +N ND Q + KQ + + D + ++ K+ D+
Sbjct: 448 DNQNANKQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDNKQNG 507
Query: 189 NLKNKSIIDEVKEGNKR 205
N +N D + GN++
Sbjct: 508 NRQN----DNKRNGNRQ 520
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.312 0.130 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,003
Number of Sequences: 429
Number of extensions: 11778
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 9
length of query: 1050
length of database: 140,377
effective HSP length: 65
effective length of query: 985
effective length of database: 112,492
effective search space: 110804620
effective search space used: 110804620
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)
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