Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003312-TA|BGIBMGA003312-PA|IPR002562|3'-5' exonuclease,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
(476 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 26 0.79
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 26 0.79
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 25 1.0
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 25 1.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 3.2
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 3.2
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 3.2
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 3.2
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 24 3.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 24 3.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 3.2
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 4.2
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 4.2
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 4.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 4.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 4.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 4.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 4.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 4.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 4.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 4.2
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 5.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 7.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 9.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 9.8
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.79
Identities = 16/75 (21%), Positives = 32/75 (42%)
Query: 146 EYLLKEYRFKSMMKDLLRLSKKLSVDDICQKYADIGFKQKSRKVAGDIPKESKLKDVRVS 205
+Y +S S + S + C + + +K+K R+ ++ KL + R S
Sbjct: 198 KYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTS 257
Query: 206 KRYVLRSKPLYQNCF 220
++ RS+ QN +
Sbjct: 258 RKRYSRSREREQNSY 272
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.8 bits (54), Expect = 0.79
Identities = 16/75 (21%), Positives = 32/75 (42%)
Query: 146 EYLLKEYRFKSMMKDLLRLSKKLSVDDICQKYADIGFKQKSRKVAGDIPKESKLKDVRVS 205
+Y +S S + S + C + + +K+K R+ ++ KL + R S
Sbjct: 209 KYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTS 268
Query: 206 KRYVLRSKPLYQNCF 220
++ RS+ QN +
Sbjct: 269 RKRYSRSREREQNSY 283
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 25.4 bits (53), Expect = 1.0
Identities = 8/36 (22%), Positives = 22/36 (61%)
Query: 378 HELPEERRKVLEQIILDYYPQHKEVSEDVLKEAVEL 413
+ +P+E+ + ++I +YY + ++ E LK +++
Sbjct: 376 YTIPKEKHVEVARLIRNYYFESNKIDETTLKHLIDV 411
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 25.4 bits (53), Expect = 1.0
Identities = 8/36 (22%), Positives = 22/36 (61%)
Query: 378 HELPEERRKVLEQIILDYYPQHKEVSEDVLKEAVEL 413
+ +P+E+ + ++I +YY + ++ E LK +++
Sbjct: 376 YTIPKEKHVEVARLIRNYYFESNKIDETTLKHLIDV 411
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +++K R+ +E KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSY 50
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +++K R+ +E KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSY 50
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +++K R+ +E KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSY 50
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 3.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +++K R+ +E KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSY 50
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 3.2
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 146 EYLLKEYRFKSMMKDLLRLSKKLSVDDICQKYADIGFKQKSRKVAGDIPKESKLKDVRVS 205
+Y +S S + S + C + + +++K R+ ++ KL + R S
Sbjct: 198 KYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS 257
Query: 206 KRYVLRSKPLYQNCF 220
++ RS+ QN +
Sbjct: 258 RKRYSRSREREQNSY 272
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 3.2
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 146 EYLLKEYRFKSMMKDLLRLSKKLSVDDICQKYADIGFKQKSRKVAGDIPKESKLKDVRVS 205
+Y +S S + S + C + + +++K R+ ++ KL + R S
Sbjct: 209 KYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS 268
Query: 206 KRYVLRSKPLYQNCF 220
++ RS+ QN +
Sbjct: 269 RKRYSRSREREQNSY 283
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.8 bits (49), Expect = 3.2
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 146 EYLLKEYRFKSMMKDLLRLSKKLSVDDICQKYADIGFKQKSRKVAGDIPKESKLKDVRVS 205
+Y +S D S + S + C + + +K+K R+ ++ KL + R S
Sbjct: 209 KYATSSNSLRSRTHDFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTS 268
Query: 206 -KRY 208
KRY
Sbjct: 269 RKRY 272
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C + + +K+K R+ ++ KL + R S++ RS+ QN +
Sbjct: 4 CSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSY 50
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 5.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 174 CQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
C K + +K+K R+ ++ KL + R S++ RS+ Q +
Sbjct: 4 CSKDRNREYKEKDRRYEKLYNEKEKLLEERTSRKRYSRSREREQKSY 50
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 7.4
Identities = 14/75 (18%), Positives = 32/75 (42%)
Query: 146 EYLLKEYRFKSMMKDLLRLSKKLSVDDICQKYADIGFKQKSRKVAGDIPKESKLKDVRVS 205
+Y ++ D S + S + C + + +++K R+ ++ KL + R S
Sbjct: 209 KYATSSNSLRNRTHDFQHTSSRYSRERRCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS 268
Query: 206 KRYVLRSKPLYQNCF 220
++ RS+ Q +
Sbjct: 269 RKRYSRSREREQRSY 283
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 9.8
Identities = 15/75 (20%), Positives = 30/75 (40%)
Query: 146 EYLLKEYRFKSMMKDLLRLSKKLSVDDICQKYADIGFKQKSRKVAGDIPKESKLKDVRVS 205
+Y +S S S + C + + +K+K R+ ++ KL + R S
Sbjct: 209 KYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTS 268
Query: 206 KRYVLRSKPLYQNCF 220
++ RS+ Q +
Sbjct: 269 RKRYSRSREREQKSY 283
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 9.8
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 165 SKKLSVDDICQKYADIGFKQKSRKVAGDIPKESKLKDVRVSKRYVLRSKPLYQNCF 220
S + S + C + + +K+K R+ ++ KL + R S++ RS+ Q +
Sbjct: 228 SSRYSRERSCSRDRNREYKKKDRRYEKLHNEKKKLLEERTSRKRYSRSREREQKSY 283
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,195
Number of Sequences: 429
Number of extensions: 6063
Number of successful extensions: 62
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34
Number of HSP's gapped (non-prelim): 28
length of query: 476
length of database: 140,377
effective HSP length: 60
effective length of query: 416
effective length of database: 114,637
effective search space: 47688992
effective search space used: 47688992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)
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