Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003306-TA|BGIBMGA003306-PA|undefined
(94 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067529-1|AAH67529.1| 563|Homo sapiens hypothetical protein FL... 30 1.0
BC067528-1|AAH67528.1| 563|Homo sapiens hypothetical protein FL... 30 1.0
BC067526-1|AAH67526.1| 563|Homo sapiens hypothetical protein FL... 30 1.0
AY189288-1|AAO86732.1| 563|Homo sapiens LP9056 protein protein. 30 1.0
AK022746-1|BAB14220.1| 563|Homo sapiens protein ( Homo sapiens ... 30 1.0
BC021706-1|AAH21706.1| 423|Homo sapiens heat shock transcriptio... 29 3.1
AF139982-1|AAD45880.1| 423|Homo sapiens LW-1 protein. 29 3.1
AF139980-1|AAD45879.1| 423|Homo sapiens LW-1 protein. 29 3.1
X68280-1|CAA48341.1| 1551|Homo sapiens protein ( H.sapiens PAPP-... 27 9.5
U28727-1|AAC50543.1| 1627|Homo sapiens pregnancy-associated plas... 27 9.5
BC078657-1|AAH78657.1| 1627|Homo sapiens pregnancy-associated pl... 27 9.5
AY623013-1|AAV41521.1| 186|Homo sapiens pregnacy-associated pla... 27 9.5
AL691426-1|CAI16715.1| 1627|Homo sapiens pregnancy-associated pl... 27 9.5
AL353141-1|CAI16083.1| 1627|Homo sapiens pregnancy-associated pl... 27 9.5
AL137024-5|CAI14281.1| 1627|Homo sapiens pregnancy-associated pl... 27 9.5
>BC067529-1|AAH67529.1| 563|Homo sapiens hypothetical protein
FLJ12684 protein.
Length = 563
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 7 GECQCRDDVWNERMKEDKHAAPTWWNKG--VAVGIINHKIFDKCLNLAYDIF 56
G+ +C D D H PTWW G + + + N +F C N Y F
Sbjct: 258 GKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFLCGNGVYKGF 309
>BC067528-1|AAH67528.1| 563|Homo sapiens hypothetical protein
FLJ12684 protein.
Length = 563
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 7 GECQCRDDVWNERMKEDKHAAPTWWNKG--VAVGIINHKIFDKCLNLAYDIF 56
G+ +C D D H PTWW G + + + N +F C N Y F
Sbjct: 258 GKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFLCGNGVYKGF 309
>BC067526-1|AAH67526.1| 563|Homo sapiens hypothetical protein
FLJ12684 protein.
Length = 563
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 7 GECQCRDDVWNERMKEDKHAAPTWWNKG--VAVGIINHKIFDKCLNLAYDIF 56
G+ +C D D H PTWW G + + + N +F C N Y F
Sbjct: 258 GKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFLCGNGVYKGF 309
>AY189288-1|AAO86732.1| 563|Homo sapiens LP9056 protein protein.
Length = 563
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 7 GECQCRDDVWNERMKEDKHAAPTWWNKG--VAVGIINHKIFDKCLNLAYDIF 56
G+ +C D D H PTWW G + + + N +F C N Y F
Sbjct: 258 GKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFLCGNGVYKGF 309
>AK022746-1|BAB14220.1| 563|Homo sapiens protein ( Homo sapiens
cDNA FLJ12684 fis, clone NT2RM4002460, weakly similar to
ENV POLYPROTEIN. ).
Length = 563
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 7 GECQCRDDVWNERMKEDKHAAPTWWNKG--VAVGIINHKIFDKCLNLAYDIF 56
G+ +C D D H PTWW G + + + N +F C N Y F
Sbjct: 258 GKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFLCGNGVYKGF 309
>BC021706-1|AAH21706.1| 423|Homo sapiens heat shock transcription
factor family, X linked 1 protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 19 RMKEDKHAAPTWWNKGVAVGIINHKIFDKCL---NLAYDIFKISFDKVPNNNIRIVGLQS 75
R+ + WW+ A +IN K+F+K + ++A+ +F + K + + G +
Sbjct: 105 RLVSSNQFSSIWWDDSGACRVINQKLFEKEILKRDVAHKVFATTSIKSFFRQLNLYGFRK 164
Query: 76 KTPARWKIF 84
+ ++ F
Sbjct: 165 RRQCTFRTF 173
>AF139982-1|AAD45880.1| 423|Homo sapiens LW-1 protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 19 RMKEDKHAAPTWWNKGVAVGIINHKIFDKCL---NLAYDIFKISFDKVPNNNIRIVGLQS 75
R+ + WW+ A +IN K+F+K + ++A+ +F + K + + G +
Sbjct: 105 RLVSSNQFSSIWWDDSGACRVINQKLFEKEILKRDVAHKVFATTSIKSFFRQLNLYGFRK 164
Query: 76 KTPARWKIF 84
+ ++ F
Sbjct: 165 RRQCTFRTF 173
>AF139980-1|AAD45879.1| 423|Homo sapiens LW-1 protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 19 RMKEDKHAAPTWWNKGVAVGIINHKIFDKCL---NLAYDIFKISFDKVPNNNIRIVGLQS 75
R+ + WW+ A +IN K+F+K + ++A+ +F + K + + G +
Sbjct: 105 RLVSSNQFSSIWWDDSGACRVINQKLFEKEILKRDVAHKVFATTSIKSFFRQLNLYGFRK 164
Query: 76 KTPARWKIF 84
+ ++ F
Sbjct: 165 RRQCTFRTF 173
>X68280-1|CAA48341.1| 1551|Homo sapiens protein ( H.sapiens PAPP-A
mRNA for pregnancy associated plasma protein-A. ).
Length = 1551
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1 MDCMKQGECQCRDDVWNERMKED 23
M C QG+C CRD E ++D
Sbjct: 1522 MSCDLQGDCACRDPQAQEHSRKD 1544
>U28727-1|AAC50543.1| 1627|Homo sapiens pregnancy-associated plasma
protein-A preproform protein.
Length = 1627
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1 MDCMKQGECQCRDDVWNERMKED 23
M C QG+C CRD E ++D
Sbjct: 1598 MSCDLQGDCACRDPQAQEHSRKD 1620
>BC078657-1|AAH78657.1| 1627|Homo sapiens pregnancy-associated plasma
protein A, pappalysin 1 protein.
Length = 1627
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1 MDCMKQGECQCRDDVWNERMKED 23
M C QG+C CRD E ++D
Sbjct: 1598 MSCDLQGDCACRDPQAQEHSRKD 1620
>AY623013-1|AAV41521.1| 186|Homo sapiens pregnacy-associated plasma
protein A protein.
Length = 186
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1 MDCMKQGECQCRDDVWNERMKED 23
M C QG+C CRD E ++D
Sbjct: 157 MSCDLQGDCACRDPQAQEHSRKD 179
>AL691426-1|CAI16715.1| 1627|Homo sapiens pregnancy-associated plasma
protein A, pappalysinadenine nucleotide translocato
protein.
Length = 1627
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1 MDCMKQGECQCRDDVWNERMKED 23
M C QG+C CRD E ++D
Sbjct: 1598 MSCDLQGDCACRDPQAQEHSRKD 1620
>AL353141-1|CAI16083.1| 1627|Homo sapiens pregnancy-associated plasma
protein A, pappalysinmolog A (yeast) (TIMM17A) pseu
protein.
Length = 1627
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1 MDCMKQGECQCRDDVWNERMKED 23
M C QG+C CRD E ++D
Sbjct: 1598 MSCDLQGDCACRDPQAQEHSRKD 1620
>AL137024-5|CAI14281.1| 1627|Homo sapiens pregnancy-associated plasma
protein A, pappalysin) (TERF1) pseudogene protein.
Length = 1627
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1 MDCMKQGECQCRDDVWNERMKED 23
M C QG+C CRD E ++D
Sbjct: 1598 MSCDLQGDCACRDPQAQEHSRKD 1620
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.326 0.140 0.485
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,105,276
Number of Sequences: 224733
Number of extensions: 517457
Number of successful extensions: 952
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 945
Number of HSP's gapped (non-prelim): 15
length of query: 94
length of database: 73,234,838
effective HSP length: 71
effective length of query: 23
effective length of database: 57,278,795
effective search space: 1317412285
effective search space used: 1317412285
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 57 (27.1 bits)
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