GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003299-TA|BGIBMGA003299-PA|IPR001206|Diacylglycerol
kinase, catalytic region, IPR000756|Diacylglycerol kinase accessory
region, IPR001660|Sterile alpha motif SAM, IPR010993|Sterile alpha
motif homology
         (1335 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    39   3e-04
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          26   1.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 38.7 bits (86), Expect = 3e-04
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 1265 PTTVAAVRSWGVKEVQNWLESLQLGEYADAFTKHDVTG-XXXXXXXXXXXXXXGVTKVGH 1323
            P    AV    +  V  WL S+++  YA++F +  VT                GVT VGH
Sbjct: 913  PLAPDAVDLTQLTSVSEWLASIKMSRYAESFERSGVTTLEAAARVTVQELTALGVTLVGH 972

Query: 1324 VKRILQAVKELQ 1335
             K+I+ +V  L+
Sbjct: 973  QKKIMNSVTALR 984


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 1248 IPKKGRWLRGRRSVSEGPTTVAAVRSWGVKEVQNWLESLQLG 1289
            IP    W R  R   + P      +SW  + + N L++L+ G
Sbjct: 439  IPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTG 480


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,130
Number of Sequences: 429
Number of extensions: 11674
Number of successful extensions: 37
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34
Number of HSP's gapped (non-prelim): 2
length of query: 1335
length of database: 140,377
effective HSP length: 66
effective length of query: 1269
effective length of database: 112,063
effective search space: 142207947
effective search space used: 142207947
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)