Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003287-TA|BGIBMGA003287-PA|IPR003961|Fibronectin, type
III, IPR010560|Neogenin, C-terminal, IPR008957|Fibronectin, type
III-like fold
(467 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 1.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 1.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 1.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 3.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 3.1
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 24 3.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 3.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 3.1
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 23 5.5
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 23 7.2
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.4 bits (53), Expect = 1.0
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 175 LPPPSSLDRRHYVPTYVASIT--GYNLLAAMTGVGAGCTATCDRRQHRPLPDQVSSNYTT 232
LPP S R Y ++T G NL+A T V +G + R + + S+Y+T
Sbjct: 1285 LPPSSPQPRLTVNHAYRDAVTVPGNNLIATNTTVSSGSSEDHRRPLSEHIYSSIDSDYST 1344
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 36 TTYSIKLQARNSKGLGPFSQTITYTTA 62
TTY +++ A N G S T+T TA
Sbjct: 946 TTYHLRIVAENEIGASDPSDTVTIITA 972
Score = 24.6 bits (51), Expect = 1.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 36 TTYSIKLQARNSKGLGPFSQTITYTTA 62
T YS+ +QA N G GP S+ TA
Sbjct: 1051 TQYSVVVQAFNKVGSGPMSEERRQHTA 1077
Score = 23.0 bits (47), Expect = 5.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 196 GYNLLAAMTGVGAGCTA 212
GY L A+ G+GAG +A
Sbjct: 751 GYYLCEAVNGIGAGLSA 767
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 383 SEHSTPAHSHSRGSVRETSPYKKSAGSSPGHIPN 416
S +TP H HS + P G +P H P+
Sbjct: 435 SHAATPHHQHSTPLAHSSYPAAIQIGHTPHHHPH 468
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 3.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 375 HSFALDATSEHSTPAHSHSRGSVRE-TSPYKKSAGSSPG 412
H + + EH TP HSR + +E SP + G+ G
Sbjct: 393 HPSTQEDSEEHLTPKRFHSRAASKEDLSPSSLADGARFG 431
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 3.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 375 HSFALDATSEHSTPAHSHSRGSVRE-TSPYKKSAGSSPG 412
H + + EH TP HSR + +E SP + G+ G
Sbjct: 393 HPSTQEDSEEHLTPKRFHSRAASKEDLSPSSLADGARFG 431
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 23.8 bits (49), Expect = 3.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 428 PEELEPLTPSRSTER 442
PEELEP TP + T R
Sbjct: 179 PEELEPGTPCQLTRR 193
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 3.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 36 TTYSIKLQARNSKGLGPFSQTITYTT 61
T Y++ +QA N G GP S+ + T
Sbjct: 1081 TKYTLVVQAYNQVGSGPLSEPLLTQT 1106
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 3.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 36 TTYSIKLQARNSKGLGPFSQTITYTT 61
T Y++ +QA N G GP S+ + T
Sbjct: 1077 TKYTLVVQAYNQVGSGPLSEPLLTQT 1102
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 23.0 bits (47), Expect = 5.5
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 177 PPSSLDRRHYVPTYVASITGYNLLAAMTGVGAGCTATCDRRQHRPLPDQVSSNYTTPNTI 236
PP SL+ + + + ++ ++ TG G R+ PL + P T+
Sbjct: 59 PPRSLEGSYDSSSGDSPVSSHSSNGIHTGFGGSIITIPPTRKLPPLHPHTAMVTHLPQTL 118
Query: 237 ASSNV 241
S NV
Sbjct: 119 TSENV 123
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 185 HYVPTYVASITGYNL 199
H V TY AS+ GY L
Sbjct: 150 HAVDTYAASVVGYLL 164
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.312 0.127 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,560
Number of Sequences: 429
Number of extensions: 3092
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 12
length of query: 467
length of database: 140,377
effective HSP length: 60
effective length of query: 407
effective length of database: 114,637
effective search space: 46657259
effective search space used: 46657259
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)
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