BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003245-TA|BGIBMGA003245-PA|undefined
(363 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 25 1.3
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 25 1.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 7.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 7.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 7.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 7.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 7.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 7.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 7.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 7.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.2
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 24.6 bits (51), Expect = 1.3
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 19 ISNRQQSNDILMLTNTVEDGRRVVYDNNNHIKINFP-EYLL 58
+ N SNDIL + N + R+ Y NHI + EY L
Sbjct: 42 VVNTLISNDILPVCNGLWRWIRLTYGQTNHISLTLDLEYEL 82
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 24.6 bits (51), Expect = 1.3
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 19 ISNRQQSNDILMLTNTVEDGRRVVYDNNNHIKINFP-EYLL 58
+ N SNDIL + N + R+ Y NHI + EY L
Sbjct: 80 VVNTLISNDILPVCNGLWRWIRLTYGQTNHISLTLDLEYEL 120
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.8
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 166 PEYSKLFITNYELNGKPNVNQQILGPNNHNNDLLNYVPSVNTPFVNYVENSNRVP 220
P+ NY+ + N N NN+NN NY + + NY+ N ++P
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNY--NNNYNN---NYNNNYKKLYKNYIINIEQIP 128
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.8
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 166 PEYSKLFITNYELNGKPNVNQQILGPNNHNNDLLNYVPSVNTPFVNYVENSNRVP 220
P+ NY+ + N N NN+NN NY + + NY+ N ++P
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNY--NNNYNN---NYNNNYKKLYKNYIINIEQIP 128
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 3.1
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 166 PEYSKLFITNYELNGKPNVNQQILGPNNHNNDLLNYVPSVNTPFVNYVE 214
P+ NY+ + N N NN+NN+ N + +NY+E
Sbjct: 312 PKIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYN-INYIE 359
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 129
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 129
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 129
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 129
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 129
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 129
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 129
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 129
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 313 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 362
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 7.2
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 170 KLFITNYELNGKPNVNQQILGPNNHNNDLL----NYVPSVNTPFVNYVEN 215
K+ N L+ N N N HN + L NY+ + P Y N
Sbjct: 313 KIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 362
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.133 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,112
Number of Sequences: 429
Number of extensions: 6044
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 17
length of query: 363
length of database: 140,377
effective HSP length: 59
effective length of query: 304
effective length of database: 115,066
effective search space: 34980064
effective search space used: 34980064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)
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