GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003244-TA|BGIBMGA003244-PA|undefined
         (220 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   3.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.1  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)

Query: 139 ECQTQSVIPFEQYP 152
           ECQ   VI F QYP
Sbjct: 28  ECQATPVIHFLQYP 41


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query: 149 EQYPVNEFYRSAPVVNYMSPQMYPE 173
           +Q+  ++FY+  P +NY +  +  E
Sbjct: 187 KQFYFHQFYKQQPDLNYRNSDVREE 211


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.134    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,348
Number of Sequences: 429
Number of extensions: 3948
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 220
length of database: 140,377
effective HSP length: 55
effective length of query: 165
effective length of database: 116,782
effective search space: 19269030
effective search space used: 19269030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)