GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003242-TA|BGIBMGA003242-PA|IPR002919|Protease inhibitor
I8, cysteine-rich trypsin inhibitor-like
         (243 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.48 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.48 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.63 
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   2.5  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   2.5  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   5.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 51   PVESVISQPLYPGSPPVATTIIDNTVSNAL 80
            PV SV +Q   PG PP AT +  N+ +  L
Sbjct: 1488 PVLSVRTQGQAPGIPPAATFLSPNSTTLVL 1517


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 51   PVESVISQPLYPGSPPVATTIIDNTVSNAL 80
            PV SV +Q   PG PP AT +  N+ +  L
Sbjct: 1484 PVLSVRTQGQAPGIPPAATFLSPNSTTLVL 1513


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 36  QIFPQLVPPCQEIIRPVESVISQPLYPGSPPVATTIIDNTVSNALANAIQLLIVSNLIEN 95
           +++P     C  +   +E + S+PL+   PP ++T +  T++            +     
Sbjct: 70  RLYPAFSSSCDPVPGNLEQIGSRPLH---PPASSTSLPATITTTTTTTTTTTATAAATAT 126

Query: 96  TMNTGI 101
           T  TG+
Sbjct: 127 TTATGL 132


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/50 (20%), Positives = 23/50 (46%)

Query: 123 EYPTQVEMVTVNPCVCESPVIETVTPIYYDASPCPNFAQEVVQIQPSSPS 172
           +Y T+ + + ++  +    ++        D  PC N  +E+ +I P + S
Sbjct: 20  DYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPCTNEGRELKKILPDALS 69


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/50 (20%), Positives = 23/50 (46%)

Query: 123 EYPTQVEMVTVNPCVCESPVIETVTPIYYDASPCPNFAQEVVQIQPSSPS 172
           +Y T+ + + ++  +    ++        D  PC N  +E+ +I P + S
Sbjct: 20  DYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPCTNEGRELKKILPDALS 69


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 34  PGQIFPQLVPPCQEIIRP 51
           P  +FP+ +PP    +RP
Sbjct: 146 PSTLFPRFIPPNAYRLRP 163


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.138    0.446 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,710
Number of Sequences: 429
Number of extensions: 4570
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 6
length of query: 243
length of database: 140,377
effective HSP length: 56
effective length of query: 187
effective length of database: 116,353
effective search space: 21758011
effective search space used: 21758011
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)