Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003237-TA|BGIBMGA003237-PA|IPR000467|D111/G-patch
(330 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 44 2e-04
AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical ... 36 0.053
AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical ... 36 0.053
AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical... 33 0.37
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 33 0.37
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 33 0.37
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 33 0.37
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 33 0.37
Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical pr... 32 0.49
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 32 0.49
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z69360-9|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 31 1.5
Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z77134-1|CAB00871.1| 293|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.6
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z78417-12|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 4.6
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 4.6
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical... 28 8.0
AF003384-10|AAB54241.3| 351|Caenorhabditis elegans Hypothetical... 28 8.0
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 48.4 bits (110), Expect = 7e-06
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 4 ARKQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIGHDPAAEFNEHWWS 55
++K +EK GW++G GLG++ G ++++K K S G+G D A+++ W S
Sbjct: 30 SKKLMEKMGWSEGDGLGRNRQGNADSVKLKANTSGRGLGADKMADYDSTWIS 81
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 4 ARKQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIGHD----PAAEFNEHW 53
A + + G G+GLGKH GISE + +R TG+GH+ A +FNE W
Sbjct: 90 AERLMAAMGHKAGEGLGKHGQGISEPIASSTQRGRTGLGHNAGKATARDFNEVW 143
>AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical
protein Y55D9A.2b protein.
Length = 511
Score = 35.5 bits (78), Expect = 0.053
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 6 KQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIG 42
K L+ GW++G+GLGK + G E + ++K + G+G
Sbjct: 439 KLLKSMGWSEGQGLGKEKQGHVEPVATEVKNNRKGLG 475
>AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical
protein Y55D9A.2a protein.
Length = 502
Score = 35.5 bits (78), Expect = 0.053
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 6 KQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIG 42
K L+ GW++G+GLGK + G E + ++K + G+G
Sbjct: 439 KLLKSMGWSEGQGLGKEKQGHVEPVATEVKNNRKGLG 475
>AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical
protein T08B2.5g protein.
Length = 695
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 2 DFARKQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIGHDPAAEFNEH 52
+ + L+ GW +G+G+GKH GI + + +R V G G A H
Sbjct: 626 NIGNRLLKSMGWKEGQGVGKHAQGIVNPI--EAERFVQGAGLGAAGSKMRH 674
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 2 DFARKQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIGHDPAAEFNEH 52
+ + L+ GW +G+G+GKH GI + + +R V G G A H
Sbjct: 769 NIGNRLLKSMGWKEGQGVGKHAQGIVNPI--EAERFVQGAGLGAAGSKMRH 817
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 2 DFARKQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIGHDPAAEFNEH 52
+ + L+ GW +G+G+GKH GI + + +R V G G A H
Sbjct: 797 NIGNRLLKSMGWKEGQGVGKHAQGIVNPI--EAERFVQGAGLGAAGSKMRH 845
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 2 DFARKQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIGHDPAAEFNEH 52
+ + L+ GW +G+G+GKH GI + + +R V G G A H
Sbjct: 855 NIGNRLLKSMGWKEGQGVGKHAQGIVNPI--EAERFVQGAGLGAAGSKMRH 903
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 2 DFARKQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGIGHDPAAEFNEH 52
+ + L+ GW +G+G+GKH GI + + +R V G G A H
Sbjct: 856 NIGNRLLKSMGWKEGQGVGKHAQGIVNPI--EAERFVQGAGLGAAGSKMRH 904
>Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical
protein ZK1320.7 protein.
Length = 371
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 12 GWTDGKGLGKHENGISEALKPKLKRSVTGIGHDPAAEFNEHWWSVLYNKAAENVQV 67
GWT+ +GLG++ +G ++ LKR+ G+G + + H+ N A +N++V
Sbjct: 275 GWTEEQGLGRNSDGQRFPIRTILKRNRAGLGAEKLVKKVTHFGPFDRN-AVKNLKV 329
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 5 RKQLEKYGWTDGKGLGKHENGISEALKPKLKRSVTGI 41
R LEK GW G+GLGK G E L +K G+
Sbjct: 642 RLMLEKMGWRPGEGLGKDATGNLEPLMLDVKSDRKGL 678
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 115 TKGGGKTENVKECDSHEENNGGLVKMTDEELFAAC 149
T GGG + +++CDS + NGG + E + +C
Sbjct: 618 TCGGGVQKGLRDCDSPKPRNGGKYCVGQRERYRSC 652
>Z69360-9|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 115 TKGGGKTENVKECDSHEENNGGLVKMTDEELFAAC 149
T GGG + +++CDS + NGG + E + +C
Sbjct: 618 TCGGGVQKGLRDCDSPKPRNGGKYCVGQRERYRSC 652
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 4 ARKQ--LEKYGWTDGKGLGKHENGISEALKPKLKRSV 38
ARKQ K W GK L ++ N I +KPK++ +V
Sbjct: 461 ARKQEIFTKIHWISGKELAQNNNSIIHTVKPKMRSNV 497
>Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical
protein F58B3.7 protein.
Length = 371
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MDFARKQLEKYGWTDGKGLGKHENGISEAL 30
+ A ++++G+ +G GLGK E G+S AL
Sbjct: 210 LGIAANIMKRHGYKEGAGLGKSEQGMSTAL 239
>Z77134-1|CAB00871.1| 293|Caenorhabditis elegans Hypothetical
protein R09H10.2 protein.
Length = 293
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 18 GLGKHENGISEALKPKLKRSVTGIGHDPAAEFNEHWWSVLYNK 60
G+G H+ G E LK LK G DP E NE ++ L K
Sbjct: 115 GIG-HDTGAEEKLKKGLKHGSEFFGADPMHEINEDLFTKLGGK 156
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 94 KKPKNGKGKQYSENFIRTEVLTKGGGKTENVKECDSHEENNGGLVKMTDEELFAACEGRT 153
K +NGKG ++ NF++T+ LT + DS +N LV + D A G T
Sbjct: 41 KTIRNGKGDKWMSNFLKTQNLTFHRSLSSPSAMSDSSSQN---LVVLADVGTAACASGWT 97
Query: 154 AH 155
+
Sbjct: 98 RY 99
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 125 KECDSHEEN-NGGLVKMTDEELFAACEGRTAHKGARHGLRALGKLARIAQQEEMLLMLPK 183
KE +S+ + +G +++ E L A E RT + +R GKL R ++ L+ K
Sbjct: 1696 KELESNSRSLSGYVIEDLFESLLAEIE-RTMRQELGSSVRKTGKLERDFEEIVKLIQNEK 1754
Query: 184 YNGYSHAKNKGDE 196
SH +K DE
Sbjct: 1755 KLALSHKSHKNDE 1767
>Z78417-12|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 125 KECDSHEEN-NGGLVKMTDEELFAACEGRTAHKGARHGLRALGKLARIAQQEEMLLMLPK 183
KE +S+ + +G +++ E L A E RT + +R GKL R ++ L+ K
Sbjct: 1696 KELESNSRSLSGYVIEDLFESLLAEIE-RTMRQELGSSVRKTGKLERDFEEIVKLIQNEK 1754
Query: 184 YNGYSHAKNKGDE 196
SH +K DE
Sbjct: 1755 KLALSHKSHKNDE 1767
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 125 KECDSHEEN-NGGLVKMTDEELFAACEGRTAHKGARHGLRALGKLARIAQQEEMLLMLPK 183
KE +S+ + +G +++ E L A E RT + +R GKL R ++ L+ K
Sbjct: 1696 KELESNSRSLSGYVIEDLFESLLAEIE-RTMRQELGSSVRKTGKLERDFEEIVKLIQNEK 1754
Query: 184 YNGYSHAKNKGDE 196
SH +K DE
Sbjct: 1755 KLALSHKSHKNDE 1767
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 104 YSENFIRTEVLTKGGGKTENVKECDSHEE--NNGGLVKMTDEELF 146
Y +F T+V+T+ +EN+ EC H E N TD E+F
Sbjct: 189 YPNSFKPTDVITQLNSSSENITECLKHLELYNQSVSSLTTDFEMF 233
>AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical
protein K07B1.7b protein.
Length = 487
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 8 LEKYGWTDGKGLGKHENG 25
L K GW G GLGK+E G
Sbjct: 404 LAKMGWKPGTGLGKNEQG 421
>AF003384-10|AAB54241.3| 351|Caenorhabditis elegans Hypothetical
protein K07B1.7a protein.
Length = 351
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 8 LEKYGWTDGKGLGKHENG 25
L K GW G GLGK+E G
Sbjct: 252 LAKMGWKPGTGLGKNEQG 269
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.308 0.126 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,610,998
Number of Sequences: 27539
Number of extensions: 236631
Number of successful extensions: 459
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 441
Number of HSP's gapped (non-prelim): 23
length of query: 330
length of database: 12,573,161
effective HSP length: 82
effective length of query: 248
effective length of database: 10,314,963
effective search space: 2558110824
effective search space used: 2558110824
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 60 (28.3 bits)
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