Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003219-TA|BGIBMGA003219-PA|IPR002129|Pyridoxal-dependent
decarboxylase
(293 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 27 0.15
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 27 0.15
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.8
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 7.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 7.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 7.4
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 9.8
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 27.5 bits (58), Expect = 0.15
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 40 YEIAPVFILMENIVLEKMRNMIGWKTGDSILAPGGSVSNLYAFLAARHHKFPQYK 94
++I F + ++ M MIGW+ G + + GS+S + + F +Y+
Sbjct: 102 FDIIMAFEMPMLVISSFMERMIGWEIGCDVYSVFGSISGMGQAMTNAAIAFDRYR 156
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 27.5 bits (58), Expect = 0.15
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 40 YEIAPVFILMENIVLEKMRNMIGWKTGDSILAPGGSVSNLYAFLAARHHKFPQYK 94
++I F + ++ M MIGW+ G + + GS+S + + F +Y+
Sbjct: 102 FDIIMAFEMPMLVISSFMERMIGWEIGCDVYSVFGSISGMGQAMTNAAIAFDRYR 156
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.8
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 29 LTAAANTNMFTYEIAPVFILMENIVLEKMRNMIGWKTGDSILAPGGSVSNLYAFL 83
L+ N+F ++ +E+I E+ WK + L S+++L A+L
Sbjct: 184 LSCQGRLNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYL 238
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.8 bits (49), Expect = 1.8
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 29 LTAAANTNMFTYEIAPVFILMENIVLEKMRNMIGWKTGDSILAPGGSVSNLYAFL 83
L+ N+F ++ +E+I E+ WK + L S+++L A+L
Sbjct: 184 LSCQGRLNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYL 238
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.8
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 29 LTAAANTNMFTYEIAPVFILMENIVLEKMRNMIGWKTGDSILAPGGSVSNLYAFL 83
L+ N+F ++ +E+I E+ WK + L S+++L A+L
Sbjct: 235 LSCQGRLNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYL 289
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.8 bits (49), Expect = 1.8
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 29 LTAAANTNMFTYEIAPVFILMENIVLEKMRNMIGWKTGDSILAPGGSVSNLYAFL 83
L+ N+F ++ +E+I E+ WK + L S+++L A+L
Sbjct: 184 LSCQGRLNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYL 238
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/30 (20%), Positives = 18/30 (60%)
Query: 25 AGEWLTAAANTNMFTYEIAPVFILMENIVL 54
AG W+ ++ F +++ + +L+ N+++
Sbjct: 76 AGHWVIHPCSSFRFYWDLCMLLLLVANLII 105
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/30 (20%), Positives = 18/30 (60%)
Query: 25 AGEWLTAAANTNMFTYEIAPVFILMENIVL 54
AG W+ ++ F +++ + +L+ N+++
Sbjct: 76 AGHWVIHPCSSFRFYWDLCMLLLLVANLII 105
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/30 (20%), Positives = 18/30 (60%)
Query: 25 AGEWLTAAANTNMFTYEIAPVFILMENIVL 54
AG W+ ++ F +++ + +L+ N+++
Sbjct: 76 AGHWVIHPCSSFRFYWDLCMLLLLVANLII 105
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 167 TSGTTVLGAFDPLSEIAD 184
T+ +TVLG F L+ +AD
Sbjct: 168 TAASTVLGFFPALNIVAD 185
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.325 0.137 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,132
Number of Sequences: 429
Number of extensions: 3311
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 10
length of query: 293
length of database: 140,377
effective HSP length: 57
effective length of query: 236
effective length of database: 115,924
effective search space: 27358064
effective search space used: 27358064
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 43 (21.4 bits)
- SilkBase 1999-2023 -