GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003204-TA|BGIBMGA003204-PA|undefined
         (50 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   0.69 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   0.69 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   3.7  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      19   3.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    18   8.5  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 0.69
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 14  IGQTAFTNVCLIVFF--IYFGTGIVCPTMANT 43
           IG T +T   + + F  IYFGTG    T   T
Sbjct: 708 IGFTMYTTCIIWLAFVPIYFGTGNAHETQITT 739


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 0.69
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 14  IGQTAFTNVCLIVFF--IYFGTGIVCPTMANT 43
           IG T +T   + + F  IYFGTG    T   T
Sbjct: 798 IGFTMYTTCIIWLAFVPIYFGTGNAHETQITT 829


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.4 bits (38), Expect = 3.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 3    NAMGQKEYGVLIG 15
            N  GQKE  VL+G
Sbjct: 1501 NEAGQKEVKVLLG 1513


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 19.4 bits (38), Expect = 3.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query: 12 VLIGQTAFTNVCLIVFFIYFG 32
          +++   AF+++  +V FIY G
Sbjct: 71 IVLQDVAFSDLHALVEFIYHG 91


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 548

 Score = 18.2 bits (35), Expect = 8.5
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 24 LIVFFIYF 31
          LI++FIYF
Sbjct: 23 LILYFIYF 30


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.140    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,398
Number of Sequences: 429
Number of extensions: 315
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 50
length of database: 140,377
effective HSP length: 30
effective length of query: 20
effective length of database: 127,507
effective search space:  2550140
effective search space used:  2550140
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.3 bits)
S2: 35 (18.2 bits)