GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003200-TA|BGIBMGA003200-PA|undefined
         (354 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.0  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   3.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   7.0  

>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 15/57 (26%), Positives = 22/57 (38%)

Query: 270 SPVDFEQYLQTTNNDSKRKNRSIFDSPEKLRHAGTEDNSLSPVMFSNHKNIHASEGH 326
           S V  E YL T     +R  +S  ++ +  RH   +D   S    +NH        H
Sbjct: 213 SLVYLEIYLATRRRLRERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSH 269


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase
          protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 28 SKLESCFSSLIKKYYEKKDLLDQTEKSLLTSKEECKQICI 67
          SKL S  S  + K Y  KD+ DQ  K+  TS +     CI
Sbjct: 15 SKLSSSDSKSLLKKYLSKDVFDQL-KTKKTSFDSTLLDCI 53


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 181 ISVAKKLCVQRDFLIVKNDTTEC 203
           + +  KL    +FLI  +DT EC
Sbjct: 155 VKLTLKLSCAMNFLIYPHDTQEC 177


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.124    0.350 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,083
Number of Sequences: 429
Number of extensions: 3630
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 354
length of database: 140,377
effective HSP length: 58
effective length of query: 296
effective length of database: 115,495
effective search space: 34186520
effective search space used: 34186520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 44 (21.8 bits)