GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003193-TA|BGIBMGA003193-PA|IPR002110|Ankyrin
         (51 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   0.17 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   0.23 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   0.23 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   0.23 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   2.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    19   3.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   6.4  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 0.17
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 9   HDAISKKRDDMLTLLLEHGADMTLTNNNGFNALH 42
           HDA  K++  + ++  E G+  T T + G   LH
Sbjct: 159 HDASEKEQLGLASVKAEPGSTGTTTTSTGTRLLH 192


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.23
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 7   PLHDA-ISKKRDDMLTLLLEHGADMTLTN 34
           P +D  + K +DD L  + E+ AD+T+ +
Sbjct: 413 PKYDCTLEKSQDDCLKAIKENNADLTVVS 441


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.23
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 7   PLHDA-ISKKRDDMLTLLLEHGADMTLTN 34
           P +D  + K +DD L  + E+ AD+T+ +
Sbjct: 413 PKYDCTLEKSQDDCLKAIKENNADLTVVS 441


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.23
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 7   PLHDA-ISKKRDDMLTLLLEHGADMTLTN 34
           P +D  + K +DD L  + E+ AD+T+ +
Sbjct: 413 PKYDCTLEKSQDDCLKAIKENNADLTVVS 441


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 2.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 30  MTLTNNNGFNALHHAALRGNPR 51
           +TL  + G  ++H+ +  G+PR
Sbjct: 303 LTLRIHRGRGSVHNGSNNGSPR 324


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 19.4 bits (38), Expect = 3.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 10  DAISKKRDDMLTLLLEHGADMTL 32
           D   KKR   L LL+E G +  L
Sbjct: 310 DVGEKKRQAFLDLLIEAGQNGVL 332


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 18.6 bits (36), Expect = 6.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 35 NNGFNALHHAALRGNPR 51
          +NG  A+     RGNP+
Sbjct: 16 SNGTGAVVECQARGNPQ 32


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,293
Number of Sequences: 429
Number of extensions: 408
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 51
length of database: 140,377
effective HSP length: 31
effective length of query: 20
effective length of database: 127,078
effective search space:  2541560
effective search space used:  2541560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.8 bits)
S2: 35 (18.2 bits)