GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003192-TA|BGIBMGA003192-PA|IPR010606|Mib_herc2,
IPR002110|Ankyrin
         (526 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   1.2  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    25   2.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   3.6  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   8.2  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 96  CRQQPIFGMFGLY-NFYLFFIITLDKVY 122
           CR    F MFGLY + ++   I++D+ Y
Sbjct: 111 CRIMAFFRMFGLYLSSFVLVCISMDRYY 138


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 471 AQADVNGFYGGHTALQTPLHIAVNKGHLGVV 501
           AQ D++ F      +Q  LH  +++GH  V+
Sbjct: 19  AQDDISKFLKDRPYVQKQLHCILDRGHCDVI 49


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 162 WLNHEEKVDWQWEDQDGGNCRRGKV 186
           W + E  +DWQ ED++      G V
Sbjct: 190 WEHKETHIDWQPEDEECTEATAGAV 214


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 104 MFGLYNFYLFFIITLDKVYVG 124
           MF  Y+F+   +ITL  +Y G
Sbjct: 1   MFKNYHFFFILVITLIFLYFG 21


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,245
Number of Sequences: 429
Number of extensions: 5551
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 4
length of query: 526
length of database: 140,377
effective HSP length: 61
effective length of query: 465
effective length of database: 114,208
effective search space: 53106720
effective search space used: 53106720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)