GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003191-TA|BGIBMGA003191-PA|undefined
         (297 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    28   0.11 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     28   0.11 
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    24   1.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.9  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 15/98 (15%)

Query: 45  ELSTDKGLSFLEMKYQMLLSYLINLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPI 104
           E++T++ L ++E+  Q   S  +   Y    +C G    S P ++   E +T      P 
Sbjct: 37  EMNTERLLPYVEIIEQPA-SKALRFRY----ECEGRSAGSIPGVNSTSENKTF-----PT 86

Query: 105 DSKLKYQIDKLVKSAVVGAVSEDDPQTYRANPNNLVSK 142
              + Y+   LV   VV  V++D P  YR +P+NLV K
Sbjct: 87  IKIVGYKGRALV---VVSCVTKDQP--YRPHPHNLVGK 119


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 15/98 (15%)

Query: 45  ELSTDKGLSFLEMKYQMLLSYLINLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPI 104
           E++T++ L ++E+  Q   S  +   Y    +C G    S P ++   E +T      P 
Sbjct: 37  EMNTERLLPYVEIIEQPA-SKALRFRY----ECEGRSAGSIPGVNSTSENKTF-----PT 86

Query: 105 DSKLKYQIDKLVKSAVVGAVSEDDPQTYRANPNNLVSK 142
              + Y+   LV   VV  V++D P  YR +P+NLV K
Sbjct: 87  IKIVGYKGRALV---VVSCVTKDQP--YRPHPHNLVGK 119


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 207 LREEYSEAPLEVSSGN----HIKQSISKYEQEKTEYEENYLTRLPV 248
           +  E S+ P  +SS +    H   + + Y  +K  Y  NY+ ++PV
Sbjct: 293 MERERSKEPKIISSLSNKTIHNNNNYNNYNNKKLYYNINYIEQIPV 338


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 61  MLLSYLINLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPIDSKLKYQIDKLVKSAV 120
           +LL  +I +T ++LR+ S E  +  PS    +E R            +         +  
Sbjct: 543 VLLVIIIIMTVLILRRASDECNKKQPSDCDTLEYRNGEVTTPLFTPAVGVAAASAGGAGG 602

Query: 121 VGAVSEDDPQTYRANPNNLV 140
            GA S  DP TY  +PN  V
Sbjct: 603 GGARSYVDPHTYE-DPNQAV 621


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 127 DDPQTYRANPNNLVSKIDNXXXXXXXXXDVEGKKEKVKSNIY 168
           D  +TY  NP   +S ++N           E ++ ++++ +Y
Sbjct: 172 DLKETYPFNPVLFISSLENISLNGIDPELTESEQHRLQNRLY 213


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 127 DDPQTYRANPNNLVSKIDNXXXXXXXXXDVEGKKEKVKSNIY 168
           D  +TY  NP   +S ++N           E ++ ++++ +Y
Sbjct: 210 DLKETYPFNPVLFISSLENISLNGIDPELTESEQHRLQNRLY 251


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.128    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,076
Number of Sequences: 429
Number of extensions: 2702
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 8
length of query: 297
length of database: 140,377
effective HSP length: 57
effective length of query: 240
effective length of database: 115,924
effective search space: 27821760
effective search space used: 27821760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 43 (21.4 bits)