GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003183-TA|BGIBMGA003183-PA|IPR003323|Ovarian tumour,
otubain
         (284 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    27   0.14 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       26   0.44 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.3  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   2.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.3  
AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex det...    22   5.4  
AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex det...    22   5.4  
AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex det...    22   5.4  
AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex det...    22   5.4  
AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex det...    22   5.4  
AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex det...    22   5.4  
AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex det...    22   5.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   5.4  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   7.1  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   9.4  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   9.4  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   9.4  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   9.4  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   9.4  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 4/97 (4%)

Query: 93  QRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPSDGDC--- 149
           +++ D       +REE   +       G     I  +    E  N+ +   P   +    
Sbjct: 196 KQQPDLNYRNSDVREEMKNIMKFWLDKGIDGFRIDAVPHLFESANISLDEPPLGKNLNLS 255

Query: 150 LYKAVSHQLQLVKQETVS-VDELREKVSNYIRDNKDD 185
           L+ +++H L   + ET   V E R+ V NY  +NK D
Sbjct: 256 LHASLNHTLTKDQPETYELVKEWRDFVDNYAEENKRD 292


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 11/17 (64%), Positives = 12/17 (70%)

Query: 94  RRRDKKSEQEKIREEEI 110
           RRR KKSE +KIR   I
Sbjct: 232 RRRSKKSEDDKIRRSSI 248


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/25 (32%), Positives = 19/25 (76%)

Query: 93  QRRRDKKSEQEKIREEEIKLQDKEN 117
           Q+R+ ++ E+ ++R +EIK++  E+
Sbjct: 170 QQRQQQRQEERRLRPDEIKVEVGED 194


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 150 LYKAVSHQLQLVKQETVSVDELREKVSNY 178
           LY  +  Q+ LV  E   +DE RE  S Y
Sbjct: 11  LYWYLILQIALVYGEISDIDEFREMTSKY 39


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 58  IRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIRE 107
           + +   I+ ++ S+  N     +E+R  K   S    +R+K    EK +E
Sbjct: 739 VENRSAIVHSEASANANSSTSSEESREEKATTSLEAEKREKSEHCEKGKE 788


>AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 86  KTKVSKAQRRRDKKSEQEKIREEE 109
           +T+  + +RRR+   +QE+ RE E
Sbjct: 30  RTQEERLRRRREWMIQQEREREHE 53


>AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 86  KTKVSKAQRRRDKKSEQEKIREEE 109
           +T+  + +RRR+   +QE+ RE E
Sbjct: 30  RTQEERLRRRREWMIQQEREREHE 53


>AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 86  KTKVSKAQRRRDKKSEQEKIREEE 109
           +T+  + +RRR+   +QE+ RE E
Sbjct: 30  RTQEERLRRRREWMIQQEREREHE 53


>AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 86  KTKVSKAQRRRDKKSEQEKIREEE 109
           +T+  + +RRR+   +QE+ RE E
Sbjct: 30  RTQEERLRRRREWMIQQEREREHE 53


>AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 86  KTKVSKAQRRRDKKSEQEKIREEE 109
           +T+  + +RRR+   +QE+ RE E
Sbjct: 30  RTQEERLRRRREWMIQQEREREHE 53


>AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 86  KTKVSKAQRRRDKKSEQEKIREEE 109
           +T+  + +RRR+   +QE+ RE E
Sbjct: 30  RTQEERLRRRREWMIQQEREREHE 53


>AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 86  KTKVSKAQRRRDKKSEQEKIREEE 109
           +T+  + +RRR+   +QE+ RE E
Sbjct: 30  RTQEERLRRRREWMIQQEREREHE 53


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 86  KTKVSKAQRRRDKKSEQEKIREEE 109
           +T+  + +RRR+   +QE+ RE E
Sbjct: 30  RTQEERLRRRREWMIQQEREREHE 53


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 122 RNIEIQTITKRLEEKNLKI 140
           +NI++  +TK LE KN  I
Sbjct: 91  KNIKLYGLTKNLEIKNYNI 109


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 70  SSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARN 123
           S E   +   +E    K + +  +R RD+K  +     + I     + +H   N
Sbjct: 42  SREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 95


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 70  SSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARN 123
           S E   +   +E    K + +  +R RD+K  +     + I     + +H   N
Sbjct: 42  SREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 95


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 70  SSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARN 123
           S E   +   +E    K + +  +R RD+K  +     + I     + +H   N
Sbjct: 42  SREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 95


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 70  SSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARN 123
           S E   +   +E    K + +  +R RD+K  +     + I     + +H   N
Sbjct: 42  SREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 95


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 70  SSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARN 123
           S E   +   +E    K + +  +R RD+K  +     + I     + +H   N
Sbjct: 275 SREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNN 328


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.129    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,759
Number of Sequences: 429
Number of extensions: 2427
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of query: 284
length of database: 140,377
effective HSP length: 57
effective length of query: 227
effective length of database: 115,924
effective search space: 26314748
effective search space used: 26314748
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)