GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003182-TA|BGIBMGA003182-PA|IPR008949|Terpenoid synthase
         (221 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.2  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 43  TAAFRLQFWNDTLKLLYKNDQTL 65
           +A FRL FW  T +  +K+   L
Sbjct: 363 SADFRLAFWRLTCRKCFKSRTNL 385


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 55  LKLLYKNDQTLKNIPANPIAQEL 77
           L+++ +ND+TL+ I    I +EL
Sbjct: 339 LEMVAQNDRTLQMIAGMKIKEEL 361


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.131    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,241
Number of Sequences: 429
Number of extensions: 1756
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 221
length of database: 140,377
effective HSP length: 55
effective length of query: 166
effective length of database: 116,782
effective search space: 19385812
effective search space used: 19385812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)