Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003176-TA|BGIBMGA003176-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(277 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 43 3e-06
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 39 4e-05
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 26 0.42
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 25 0.74
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 25 0.98
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 25 0.98
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 25 0.98
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 25 0.98
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 23 3.9
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 5.2
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.9
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 42.7 bits (96), Expect = 3e-06
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 32 RNRRYAR-HSFVAGHRPQKRLFTPEIKRYLKDWLVRRRDNPYPNREEKKYLSRETGLTYI 90
R RR R H+ G +KR T L +N Y ++ LSR+ GLT
Sbjct: 3 RTRRVKRSHNGKNGSPEEKRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEA 62
Query: 91 QICNWFANWRRKLKNANGDRHHL 113
QI WF N R K+K A+G ++ L
Sbjct: 63 QIKIWFQNKRAKIKKASGQKNPL 85
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 39.1 bits (87), Expect = 4e-05
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 69 DNPYPNREEKKYLSRETGLTYIQICNWFANWRRKLKNANGDRHHL 113
+N Y ++ LSR+ GL QI WF N R K+K A+G ++ L
Sbjct: 41 ENRYLTERRRQQLSRDLGLNEAQIKIWFQNKRAKIKKASGQKNPL 85
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 25.8 bits (54), Expect = 0.42
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 77 EKKYLSRETGLTYIQICNWFANWRRKLK 104
E+ L+ GLT Q+ WF N R K K
Sbjct: 10 ERAELAASLGLTQTQVKIWFQNRRSKYK 37
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 25.0 bits (52), Expect = 0.74
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 70 NPYPNREEKKYLSRETGLTYIQICNWFANWRRKLK 104
N Y R + ++ LT QI WF N R KLK
Sbjct: 30 NHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK 64
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 24.6 bits (51), Expect = 0.98
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 70 NPYPNREEKKYLSRETGLTYIQICNWFANWRRKLKNAN 107
N Y R + ++ LT QI WF N R K K N
Sbjct: 30 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 67
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 24.6 bits (51), Expect = 0.98
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 144 EPELCSPDQNSLENEVILTDSPSS 167
+PEL +Q+ L+N + DS SS
Sbjct: 197 DPELTESEQHRLQNRLYTNDSTSS 220
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 24.6 bits (51), Expect = 0.98
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 144 EPELCSPDQNSLENEVILTDSPSS 167
+PEL +Q+ L+N + DS SS
Sbjct: 235 DPELTESEQHRLQNRLYTNDSTSS 258
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 24.6 bits (51), Expect = 0.98
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 70 NPYPNREEKKYLSRETGLTYIQICNWFANWRRKLKNAN 107
N Y R + ++ LT QI WF N R K K N
Sbjct: 292 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 329
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 70 NPYPNREEKKYLSRETGLTYIQICNWFANWRRKLK 104
N Y R + ++ LT QI WF N R K K
Sbjct: 30 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 64
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 169 LYEKETEAALKDRCDNLNNNSYSFD 193
+++ E AL +R + NN ++FD
Sbjct: 373 IHKNEYMLALSNRMQKIVNNDFNFD 397
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 6.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 89 YIQICNWFANWRRKL 103
Y Q+ NW+ W+ L
Sbjct: 668 YDQVTNWYMGWKGML 682
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.130 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,481
Number of Sequences: 429
Number of extensions: 5002
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 11
length of query: 277
length of database: 140,377
effective HSP length: 57
effective length of query: 220
effective length of database: 115,924
effective search space: 25503280
effective search space used: 25503280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)
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