Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003155-TA|BGIBMGA003155-PA|IPR000597|Ribosomal protein
L3, IPR009000|Translation factor
(364 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06323-1|CAA29639.1| 348|Homo sapiens protein ( Human MRL3 mRNA... 225 2e-58
CR456720-1|CAG33001.1| 348|Homo sapiens MRPL3 protein. 225 2e-58
BC003375-1|AAH03375.1| 348|Homo sapiens mitochondrial ribosomal... 225 2e-58
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 34 0.90
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 34 0.90
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 34 0.90
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 34 0.90
D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein. 34 0.90
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 34 0.90
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 34 0.90
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 34 0.90
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 34 0.90
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 34 0.90
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 34 0.90
AL031177-11|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 34 0.90
AL031177-10|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 34 0.90
U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like... 33 1.6
BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-li... 33 1.6
AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L... 33 1.6
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 32 3.6
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 32 3.6
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 32 3.6
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 32 3.6
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 32 3.6
M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein. 31 4.8
AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha ... 31 4.8
AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha ... 31 4.8
X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3 prot... 31 6.4
M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3 prot... 31 6.4
CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein. 31 6.4
BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein. 31 6.4
BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for IM... 31 6.4
BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3, i... 31 6.4
BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3, i... 31 6.4
BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein. 31 6.4
BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
AK091796-1|BAC03749.1| 283|Homo sapiens protein ( Homo sapiens ... 31 6.4
AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3 pr... 31 6.4
AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3 pr... 31 6.4
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 31 8.4
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 31 8.4
M30838-1|AAA36510.1| 248|Homo sapiens protein ( Human pulmonary... 31 8.4
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 31 8.4
>X06323-1|CAA29639.1| 348|Homo sapiens protein ( Human MRL3 mRNA
for ribosomal protein L3 homologue ( MRL3 = mammalian
ribosome L3 ). ).
Length = 348
Score = 225 bits (550), Expect = 2e-58
Identities = 122/322 (37%), Positives = 186/322 (57%), Gaps = 22/322 (6%)
Query: 43 KERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGL 102
K W D++L++EN F+++++ D+ +AQ A + P+ ++ W P + RVGL
Sbjct: 44 KSGTWWDEHLSEENVPFIKQLVSDEDKAQLASK----LCPLKDEPWPIHPWEPGSFRVGL 99
Query: 103 IARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILV 162
IA K+G PLW KDG+K TLLQV D HV+KY E K + V
Sbjct: 100 IALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNG------------KMATLSV 147
Query: 163 GAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDGR 222
G + + + +G+ PK+ + F ++ +A+ GTPLYA HFR G +D
Sbjct: 148 GGKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVT 207
Query: 223 SKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWR 282
+KT+ +GFQGVMKRWGFKG PA+HG TKTHRRPG + + G+ RVWPGTKMPG MGN +R
Sbjct: 208 AKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYR 266
Query: 283 TLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLP----LKRNKTAPPFPTQPFM 338
T G+K+ RI+TK+N+I+ G ++PG + + D+ LP L +N P +
Sbjct: 267 TEYGLKVWRINTKHNIIYVNG-SVPGHKNCLVKVKDSKLPAYKDLGKNLPFPTYFPDGDE 325
Query: 339 NDVPKEYFEDTIHPFDEPTISY 360
++P++ +++ + P+I++
Sbjct: 326 EELPEDLYDENVCQPGAPSITF 347
>CR456720-1|CAG33001.1| 348|Homo sapiens MRPL3 protein.
Length = 348
Score = 225 bits (550), Expect = 2e-58
Identities = 122/322 (37%), Positives = 186/322 (57%), Gaps = 22/322 (6%)
Query: 43 KERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGL 102
K W D++L++EN F+++++ D+ +AQ A + P+ ++ W P + RVGL
Sbjct: 44 KSGTWWDEHLSEENVPFIKQLVSDEDKAQLASK----LCPLKDEPWPIHPWEPGSFRVGL 99
Query: 103 IARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILV 162
IA K+G PLW KDG+K TLLQV D HV+KY E K + V
Sbjct: 100 IALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNG------------KMATLSV 147
Query: 163 GAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDGR 222
G + + + +G+ PK+ + F ++ +A+ GTPLYA HFR G +D
Sbjct: 148 GGKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVT 207
Query: 223 SKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWR 282
+KT+ +GFQGVMKRWGFKG PA+HG TKTHRRPG + + G+ RVWPGTKMPG MGN +R
Sbjct: 208 AKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYR 266
Query: 283 TLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLP----LKRNKTAPPFPTQPFM 338
T G+K+ RI+TK+N+I+ G ++PG + + D+ LP L +N P +
Sbjct: 267 TEYGLKVWRINTKHNIIYVNG-SVPGHKNCLVKVKDSKLPAYKDLGKNLPFPTYFPDGDE 325
Query: 339 NDVPKEYFEDTIHPFDEPTISY 360
++P++ +++ + P+I++
Sbjct: 326 EELPEDLYDENVCQPGAPSITF 347
>BC003375-1|AAH03375.1| 348|Homo sapiens mitochondrial ribosomal
protein L3 protein.
Length = 348
Score = 225 bits (550), Expect = 2e-58
Identities = 122/322 (37%), Positives = 186/322 (57%), Gaps = 22/322 (6%)
Query: 43 KERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGL 102
K W D++L++EN F+++++ D+ +AQ A + P+ ++ W P + RVGL
Sbjct: 44 KSGTWWDEHLSEENVPFIKQLVSDEDKAQLASK----LCPLKDEPWPIHPWEPGSFRVGL 99
Query: 103 IARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILV 162
IA K+G PLW KDG+K TLLQV D HV+KY E K + V
Sbjct: 100 IALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNG------------KMATLSV 147
Query: 163 GAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDGR 222
G + + + +G+ PK+ + F ++ +A+ GTPLYA HFR G +D
Sbjct: 148 GGKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVT 207
Query: 223 SKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWR 282
+KT+ +GFQGVMKRWGFKG PA+HG TKTHRRPG + + G+ RVWPGTKMPG MGN +R
Sbjct: 208 AKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYR 266
Query: 283 TLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLP----LKRNKTAPPFPTQPFM 338
T G+K+ RI+TK+N+I+ G ++PG + + D+ LP L +N P +
Sbjct: 267 TEYGLKVWRINTKHNIIYVNG-SVPGHKNCLVKVKDSKLPAYKDLGKNLPFPTYFPDGDE 325
Query: 339 NDVPKEYFEDTIHPFDEPTISY 360
++P++ +++ + P+I++
Sbjct: 326 EELPEDLYDENVCQPGAPSITF 347
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 758 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 805
>D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein.
Length = 1678
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>AL031177-11|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>AL031177-10|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.90
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 227 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 33.1 bits (72), Expect = 1.6
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 199 ESALPNGTPLYATHFRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 258
++ L P+++ F + ID + T RG +GV RW K +P K R+ I
Sbjct: 198 QARLEKQVPVHSV-FSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRK--THKGLRKVACI 254
Query: 259 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRI 292
G+ ARV G G RT KI RI
Sbjct: 255 GA-WHPARVGCSIARAGQKGYHHRTELNKKIFRI 287
>BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 33.1 bits (72), Expect = 1.6
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 199 ESALPNGTPLYATHFRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 258
++ L P+++ F + ID + T RG +GV RW K +P K R+ I
Sbjct: 198 QARLEKQVPVHSV-FSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRK--THKGLRKVACI 254
Query: 259 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRI 292
G+ ARV G G RT KI RI
Sbjct: 255 GA-WHPARVGCSIARAGQKGYHHRTELNKKIFRI 287
>AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L3
like protein.
Length = 406
Score = 33.1 bits (72), Expect = 1.6
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 199 ESALPNGTPLYATHFRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 258
++ L P+++ F + ID + T RG +GV RW K +P K R+ I
Sbjct: 197 QARLEKQVPVHSV-FSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRK--THKGLRKVACI 253
Query: 259 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRI 292
G+ ARV G G RT KI RI
Sbjct: 254 GA-WHPARVGCSIARAGQKGYHHRTELNKKIFRI 286
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 222 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 280
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 371 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 425
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 222 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 280
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 518 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 572
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 222 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 280
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 518 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 572
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 222 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 280
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 518 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 572
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 222 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 280
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 518 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 572
>M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein.
Length = 675
Score = 31.5 bits (68), Expect = 4.8
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 228 RGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
RG QG+ G G P +G T PG GS G+ + PG+ PGH G
Sbjct: 274 RGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQ--PGS--PGHQG 320
>AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha 2
protein.
Length = 689
Score = 31.5 bits (68), Expect = 4.8
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 228 RGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
RG QG+ G G P +G T PG GS G+ + PG+ PGH G
Sbjct: 288 RGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQ--PGS--PGHQG 334
>AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha 2
chain protein.
Length = 689
Score = 31.5 bits (68), Expect = 4.8
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 228 RGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 278
RG QG+ G G P +G T PG GS G+ + PG+ PGH G
Sbjct: 288 RGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQ--PGS--PGHQG 334
>X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3
protein.
Length = 398
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 206 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 260
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 261 VARAGQKGYHHRTEINKKIYKIGQGY 286
>CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein.
Length = 251
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 59 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 113
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 114 VARAGQKGYHHRTEINKKIYKIGQGY 139
>BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for
IMAGE:3538792) protein.
Length = 374
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 182 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 236
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 237 VARAGQKGYHHRTEINKKIYKIGQGY 262
>BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein.
Length = 292
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 100 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 154
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 155 VARAGQKGYHHRTEINKKIYKIGQGY 180
>BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>AK091796-1|BAC03749.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ34477 fis, clone HLUNG2003833. ).
Length = 283
Score = 31.1 bits (67), Expect = 6.4
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 221 GRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 280
G + + D G + +RW +G+ G + PGN+G+G A P + G R
Sbjct: 61 GPAPSSDPGIRSPSQRW-LRGLATQPGTPRPRSHPGNLGTGEGWATTRPRPRCSQTRGRR 119
>AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3
protein.
Length = 343
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 156 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 210
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 211 VARAGQKGYHHRTEINKKIYKIGQGY 236
>AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 31.1 bits (67), Expect = 6.4
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 213 FRVGDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 270
F + ID T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 271 TKMPGHMGNRWRTLRGVKILRIDTKY 296
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 30.7 bits (66), Expect = 8.4
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 216 GDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK-MP 274
GD + R K +G +G GF G P SHG G+ G G+ PG K P
Sbjct: 557 GDMVVSRVKG-HKGERGPDGPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFP 615
Query: 275 GHMG 278
G +G
Sbjct: 616 GPLG 619
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4
chain protein.
Length = 1690
Score = 30.7 bits (66), Expect = 8.4
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 216 GDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK-MP 274
GD + R K +G +G GF G P SHG G+ G G+ PG K P
Sbjct: 557 GDMVVSRVKG-HKGERGPDGPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFP 615
Query: 275 GHMG 278
G +G
Sbjct: 616 GPLG 619
>M30838-1|AAA36510.1| 248|Homo sapiens protein ( Human pulmonary
surfactant apoprotein (PSAP) gene, complete cds. ).
Length = 248
Score = 30.7 bits (66), Expect = 8.4
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 238 GFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGN 279
G G P SHG+ H R G G G + P +MP GN
Sbjct: 31 GIPGTPGSHGLPGRHGRDGLKGDLGPPGPMGPPGEMPCPPGN 72
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 30.7 bits (66), Expect = 8.4
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 216 GDCIDGRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK-MP 274
GD + R K +G +G GF G P SHG G+ G G+ PG K P
Sbjct: 557 GDMVVSRVKG-HKGERGPDGPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFP 615
Query: 275 GHMG 278
G +G
Sbjct: 616 GPLG 619
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.138 0.444
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,587,939
Number of Sequences: 224733
Number of extensions: 2871006
Number of successful extensions: 8555
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 7977
Number of HSP's gapped (non-prelim): 617
length of query: 364
length of database: 73,234,838
effective HSP length: 91
effective length of query: 273
effective length of database: 52,784,135
effective search space: 14410068855
effective search space used: 14410068855
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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