Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003147-TA|BGIBMGA003147-PA|IPR007087|Zinc finger,
C2H2-type
(214 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 29 0.025
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 28 0.076
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 24 0.94
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 24 1.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.2
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 2.9
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 5.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.0
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 22 5.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 6.6
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 6.6
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 29.5 bits (63), Expect = 0.025
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 86 WTCAFCGKSFYEERHLDAHFDHRHKNQINKAEDAVC 121
+TC CGK+ + L H + +H +N A A+C
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALC 407
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 27.9 bits (59), Expect = 0.076
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 86 WTCAFCGKSFYEERHLDAHFDHRHKNQINKAEDAVCLADYC 126
+TC CGK + L H +H + + +C YC
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYC 46
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 24.2 bits (50), Expect = 0.94
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 36 SKIVRKVIQNKWLPVLERFQVKLPLE 61
SKI +++ WLPV ++ L LE
Sbjct: 427 SKIAENLLEKNWLPVHTSYKSGLNLE 452
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 23.8 bits (49), Expect = 1.2
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 59 PLECPFHPARDIFAPQHAAKM----QHRPSQ--WTCAFCGKSFYEERHLDAHFDHRHK 110
P ECP+ R F+ ++ K +H S + C FC + + + L H +H+
Sbjct: 5 PQECPY--CRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHR 60
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 19 IPWPGPSVFKISCSRD 34
+ W P+V+K SCS D
Sbjct: 141 VVWQPPAVYKSSCSID 156
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 86 WTCAFCGKSFYEERHLDAH 104
+ C +C KSF + +L H
Sbjct: 120 YQCEYCSKSFSVKENLSVH 138
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 86 WTCAFCGKSFYEERHLDAH 104
+TC CGKSF L H
Sbjct: 232 YTCDICGKSFGYNHVLKLH 250
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 86 WTCAFCGKSFYEERHLDAHF 105
+ C CGK+F L H+
Sbjct: 92 YRCNICGKTFAVPARLTRHY 111
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 21 WPGPSVFKISCSRD 34
W P++FK SC D
Sbjct: 135 WTPPAIFKSSCEID 148
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 5.0
Identities = 5/15 (33%), Positives = 13/15 (86%)
Query: 24 PSVFKISCSRDNSKI 38
P +F++SC+ ++S++
Sbjct: 418 PDIFRVSCATEHSQL 432
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.8 bits (44), Expect = 5.0
Identities = 5/15 (33%), Positives = 13/15 (86%)
Query: 24 PSVFKISCSRDNSKI 38
P +F++SC+ ++S++
Sbjct: 124 PDIFRVSCATEHSQL 138
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 6.6
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 19 IPWPGPSVFKISCSRD 34
+ W P+++K SC D
Sbjct: 141 VEWKPPAIYKSSCEID 156
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 6.6
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 19 IPWPGPSVFKISCSRD 34
+ W P+++K SC D
Sbjct: 137 VEWKPPAIYKSSCEID 152
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.138 0.454
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,879
Number of Sequences: 429
Number of extensions: 2184
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 14
length of query: 214
length of database: 140,377
effective HSP length: 55
effective length of query: 159
effective length of database: 116,782
effective search space: 18568338
effective search space used: 18568338
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)
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