GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003145-TA|BGIBMGA003145-PA|undefined
         (1036 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   3.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   3.2  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query: 738  VYQMSAQSHNIEGFTEQDYT 757
            VYQ+  ++HN+ G  + ++T
Sbjct: 1567 VYQLKVETHNVAGSNQAEFT 1586


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query: 738  VYQMSAQSHNIEGFTEQDYT 757
            VYQ+  ++HN+ G  + ++T
Sbjct: 1563 VYQLKVETHNVAGSNQAEFT 1582


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.138    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,697
Number of Sequences: 429
Number of extensions: 14533
Number of successful extensions: 42
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 4
length of query: 1036
length of database: 140,377
effective HSP length: 65
effective length of query: 971
effective length of database: 112,492
effective search space: 109229732
effective search space used: 109229732
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)