GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003141-TA|BGIBMGA003141-PA|IPR005320|Peptidase S51,
dipeptidase E
         (242 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   1.5  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   4.4  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 107 VQLMKSKIDDGSLIYIGSSAG 127
           VQL+  +++  +L+YIG + G
Sbjct: 188 VQLLSCEVNGSTLVYIGDNEG 208


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/27 (40%), Positives = 12/27 (44%)

Query: 51  DGYTTKIKNVIDQWGFTVTGLHTYPKP 77
           DG    I  V D+ GF V G H    P
Sbjct: 81  DGQQVSITYVADENGFQVQGSHIPTAP 107


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.136    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,814
Number of Sequences: 429
Number of extensions: 2848
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 242
length of database: 140,377
effective HSP length: 56
effective length of query: 186
effective length of database: 116,353
effective search space: 21641658
effective search space used: 21641658
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)