Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003137-TA|BGIBMGA003137-PA|undefined
(50 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 20 2.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 2.8
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 19 3.7
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 19 3.7
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 19 3.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 6.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 19 6.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 18 8.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 18 8.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 18 8.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 18 8.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 18 8.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 18 8.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 18 8.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 18 8.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 18 8.5
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 20.2 bits (40), Expect = 2.1
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 24 ESPAPPPDGGWGW 36
+S PPPD GW
Sbjct: 662 DSDPPPPDDISGW 674
Score = 18.2 bits (35), Expect = 8.5
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 12 ENTEIEDSREGSESPAPPPDGGW 34
+ T ++ S+ P P GW
Sbjct: 652 DTTNFDEYPPDSDPPPPDDISGW 674
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.8 bits (39), Expect = 2.8
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 26 PAPPPDGGWGWMV 38
P PPP G ++V
Sbjct: 1358 PPPPPSSGQAYLV 1370
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 19.4 bits (38), Expect = 3.7
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 1 MSLSASKNSKNENTEIE 17
M++++ ++S+N+NT E
Sbjct: 257 MNVASLRSSENQNTSAE 273
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 19.4 bits (38), Expect = 3.7
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 1 MSLSASKNSKNENTEIE 17
M++++ ++S+N+NT E
Sbjct: 133 MNVASLRSSENQNTSAE 149
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 19.4 bits (38), Expect = 3.7
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 1 MSLSASKNSKNENTEIE 17
M++++ ++S+N+NT E
Sbjct: 7 MNVASLRSSENQNTSAE 23
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 18.6 bits (36), Expect = 6.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 22 GSESPAPPP 30
GS P PPP
Sbjct: 1855 GSPEPPPPP 1863
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 18.6 bits (36), Expect = 6.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 7 KNSKNENTEIEDSREGSES 25
++ EN E ED R SE+
Sbjct: 280 RDDDEENEEEEDGRGQSEA 298
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 18.2 bits (35), Expect = 8.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 5 ASKNSKNENTEIEDSREGSESPAPPPDG 32
+SK+ +I+D S A PP G
Sbjct: 337 SSKSLLANVLDIDDDIRHKNSAANPPSG 364
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 18.2 bits (35), Expect = 8.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 5 ASKNSKNENTEIEDSREGSESPAPPPDG 32
+SK+ +I+D S A PP G
Sbjct: 337 SSKSLLANVLDIDDDIRHKNSAANPPSG 364
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 18.2 bits (35), Expect = 8.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 5 ASKNSKNENTEIEDSREGSESPAPPPDG 32
+SK+ +I+D S A PP G
Sbjct: 337 SSKSLLANVLDIDDDIRHKNSAANPPSG 364
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 18.2 bits (35), Expect = 8.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 5 ASKNSKNENTEIEDSREGSESPAPPPDG 32
+SK+ +I+D S A PP G
Sbjct: 337 SSKSLLANVLDIDDDIRHKNSAANPPSG 364
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 18.2 bits (35), Expect = 8.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 5 ASKNSKNENTEIEDSREGSESPAPPPDG 32
+SK+ +I+D S A PP G
Sbjct: 337 SSKSLLANVLDIDDDIRHKNSAANPPSG 364
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 18.2 bits (35), Expect = 8.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 5 ASKNSKNENTEIEDSREGSESPAPPPDG 32
+SK+ +I+D S A PP G
Sbjct: 337 SSKSLLANVLDIDDDIRHKNSAANPPSG 364
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 18.2 bits (35), Expect = 8.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 5 ASKNSKNENTEIEDSREGSESPAPPPDG 32
+SK+ +I+D S A PP G
Sbjct: 405 SSKSLLANVLDIDDDIRHKNSAANPPSG 432
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 18.2 bits (35), Expect = 8.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 5 ASKNSKNENTEIEDSREGSESPAPPPDG 32
+SK+ +I+D S A PP G
Sbjct: 405 SSKSLLANVLDIDDDIRHKNSAANPPSG 432
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 18.2 bits (35), Expect = 8.5
Identities = 6/11 (54%), Positives = 6/11 (54%)
Query: 26 PAPPPDGGWGW 36
P PPP G W
Sbjct: 376 PPPPPIRGGEW 386
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.308 0.125 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,626
Number of Sequences: 429
Number of extensions: 591
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of query: 50
length of database: 140,377
effective HSP length: 30
effective length of query: 20
effective length of database: 127,507
effective search space: 2550140
effective search space used: 2550140
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.5 bits)
S2: 35 (18.2 bits)
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