GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003104-TA|BGIBMGA003104-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine, IPR001314|Peptidase S1A, chymotrypsin
         (241 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    51   1e-08

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 65/243 (26%), Positives = 96/243 (39%), Gaps = 32/243 (13%)

Query: 5   IVGGYLASIKEYPHSAFLRAGCVTPTGNVRKWQCGSSIINQMMLLTAAHCL--EEAKEIL 62
           IVGG    I E+P  A ++       G +    CG++II++  +LTAAHC+  E   ++ 
Sbjct: 161 IVGGTNTGINEFPMMAGIKR--TYEPGMI----CGATIISKRYVLTAAHCIIDENTTKLA 214

Query: 63  VTVGSEN------KNMGLTIKAGRYIIHENYD----PSALHSDLGLIGLSKPLKFTSKIQ 112
           + VG  +       N  +     + IIH  YD         +D+ L+   K +KF  K+ 
Sbjct: 215 IVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVG 274

Query: 113 RVAL----MRSPPYKEKAFVAGWGVVDEINIRVIPVLKYLDQIVRNQNSCYKEKIYEAIP 168
              L               V GWG     N  +  +L+     +  Q  CY  K Y  I 
Sbjct: 275 PACLPFQHFLDSFAGSDVTVLGWGHT-SFNGMLSHILQKTTLNMLTQVECY--KYYGNIM 331

Query: 169 GTICASNAKASEYPSMGDSGSAL----IVRGYIQIGLVSHKIPL-KAPNVVFYTDVGYYY 223
                + AK  +   M   G  L      +  + IG++S      K PN    T VG Y 
Sbjct: 332 VNAMCAYAKGKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAECGKYPN--GNTKVGSYI 389

Query: 224 DWI 226
           DWI
Sbjct: 390 DWI 392


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.137    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,708
Number of Sequences: 429
Number of extensions: 2953
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 241
length of database: 140,377
effective HSP length: 56
effective length of query: 185
effective length of database: 116,353
effective search space: 21525305
effective search space used: 21525305
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)