Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003100-TA|BGIBMGA003100-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(462 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113669-1|AAI13670.1| 777|Homo sapiens intraflagellar transpor... 392 e-108
BC101494-1|AAI01495.1| 777|Homo sapiens intraflagellar transpor... 392 e-108
AB037795-1|BAA92612.1| 764|Homo sapiens KIAA1374 protein protein. 392 e-108
BC042027-1|AAH42027.1| 536|Homo sapiens IFT80 protein protein. 359 2e-98
BC130473-1|AAI30474.1| 522|Homo sapiens transducin (beta)-like ... 48 5e-05
BC130471-1|AAI30472.1| 522|Homo sapiens transducin (beta)-like ... 48 5e-05
AF332222-1|AAK13474.1| 522|Homo sapiens transducin beta-like 1 ... 48 5e-05
AF332221-1|AAK13473.1| 522|Homo sapiens transducin beta-like 1 ... 48 5e-05
AF332220-1|AAK13472.1| 522|Homo sapiens transducin beta-like 1 ... 48 5e-05
BC113421-1|AAI13422.1| 514|Homo sapiens transducin (beta)-like ... 47 2e-04
AK022956-1|BAB14331.1| 514|Homo sapiens protein ( Homo sapiens ... 47 2e-04
AF314544-1|AAK00301.1| 514|Homo sapiens nuclear receptor co-rep... 47 2e-04
AF268193-1|AAG44736.1| 514|Homo sapiens IRA1 protein. 47 2e-04
Y12781-1|CAA73319.1| 577|Homo sapiens transducin (beta) like 1 ... 46 3e-04
BC052304-1|AAH52304.1| 577|Homo sapiens transducin (beta)-like ... 46 3e-04
BC032708-1|AAH32708.1| 526|Homo sapiens TBL1X protein protein. 46 3e-04
AB209608-1|BAD92845.1| 540|Homo sapiens transducin beta-like 1X... 46 3e-04
BC012075-1|AAH12075.1| 485|Homo sapiens notchless homolog 1 (Dr... 38 0.056
BC002884-1|AAH02884.2| 484|Homo sapiens NLE1 protein protein. 38 0.056
AK001320-1|BAA91621.1| 485|Homo sapiens protein ( Homo sapiens ... 38 0.056
AB209111-1|BAD92348.1| 487|Homo sapiens Notchless gene homolog ... 38 0.056
BC117291-1|AAI17292.1| 925|Homo sapiens coronin 7 protein. 36 0.30
BC117289-1|AAI17290.1| 925|Homo sapiens coronin 7 protein. 36 0.30
AK025674-1|BAB15211.1| 925|Homo sapiens protein ( Homo sapiens ... 36 0.30
U63810-1|AAC24948.1| 339|Homo sapiens WD40 protein Ciao 1 protein. 34 0.92
EF011618-1|ABK41108.1| 339|Homo sapiens CDW8/WDR39 protein. 34 0.92
CR456802-1|CAG33083.1| 339|Homo sapiens CIAO1 protein. 34 0.92
BC032812-1|AAH32812.1| 339|Homo sapiens cytosolic iron-sulfur p... 34 0.92
BC013997-1|AAH13997.1| 353|Homo sapiens guanine nucleotide bind... 34 0.92
BC001395-1|AAH01395.1| 339|Homo sapiens cytosolic iron-sulfur p... 34 0.92
AK223257-1|BAD96977.1| 339|Homo sapiens WD40 protein Ciao1 vari... 34 0.92
AF501885-1|AAM15921.1| 353|Homo sapiens guanine nucleotide bind... 34 0.92
AF300650-1|AAG18444.1| 395|Homo sapiens guanine nucleotide bind... 34 0.92
AF017656-1|AAC63826.1| 353|Homo sapiens G protein beta 5 subuni... 34 0.92
AC004020-1|AAC23493.1| 339|Homo sapiens Unknown gene product pr... 34 0.92
AL133352-1|CAH73561.1| 1179|Homo sapiens Sec31 homolog B (S. cer... 32 4.9
AF274863-1|AAF78243.1| 1179|Homo sapiens secretory pathway compo... 32 4.9
BC126381-1|AAI26382.1| 848|Homo sapiens WD repeat domain 78 pro... 31 8.5
BC126379-1|AAI26380.1| 848|Homo sapiens WD repeat domain 78 pro... 31 8.5
BC044569-1|AAH44569.1| 348|Homo sapiens SEC31B protein protein. 31 8.5
BC034946-1|AAH34946.1| 348|Homo sapiens SEC31B protein protein. 31 8.5
AL592161-2|CAH72705.1| 848|Homo sapiens WD repeat domain 78 pro... 31 8.5
AL354978-2|CAH71842.1| 848|Homo sapiens WD repeat domain 78 pro... 31 8.5
AL139216-3|CAI18872.1| 848|Homo sapiens WD repeat domain 78 pro... 31 8.5
>BC113669-1|AAI13670.1| 777|Homo sapiens intraflagellar transport
80 homolog (Chlamydomonas) protein.
Length = 777
Score = 392 bits (964), Expect = e-108
Identities = 183/445 (41%), Positives = 292/445 (65%), Gaps = 10/445 (2%)
Query: 2 IWDTFGQQISVSVKHDQPITSVSWSPAGDMFVAGSFNLTRLCNANGWSYCLDRPATGSIY 61
+WD++G+ + S H+ PITSV+W+P G++F GSF+ RLC+ GWSY L++P TGSI+
Sbjct: 214 VWDSYGRPLYNSQPHEHPITSVAWAPDGELFAVGSFHTLRLCDKTGWSYALEKPNTGSIF 273
Query: 62 DIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQIGRKVISIKDIVSEENDQLDY 121
+IAWS+DGTQ+A AC NGHV+FAH++++ + WKN+ T R+ + +++++++ D L++
Sbjct: 274 NIAWSIDGTQIAGACGNGHVVFAHVVEQHWEWKNFQVTLTKRRAMQVRNVLNDAVDLLEF 333
Query: 122 PDRVIQISLGFNHLVVATVKQCFIHKLSSWNTPVTFDLKEGTVSMILLSERCLCVVERAG 181
DRVI+ SL + HLVV+T QC++ +WNTP+ FDLKEGTVS+IL +ER +V+ +
Sbjct: 334 RDRVIKASLNYAHLVVSTSLQCYVFSTKNWNTPIIFDLKEGTVSLILQAERHFLLVDGSS 393
Query: 182 ISVYSYMGRLLASPRCGG-RSETLGKSSVSLGPDTLAVVDQTDRKLIHVFDLPTGLIVRS 240
I +YSY GR ++SP+ G R++ L +VSL DT+A+ D+ D K+I +F+ TG +
Sbjct: 394 IYLYSYEGRFISSPKFPGMRTDILNAQTVSLSNDTIAIRDKADEKIIFLFEASTG---KP 450
Query: 241 STDSTVTKLNHKMTVSTIALSQTGPINDRQMALLDYNKDLYVVSVK--DVKPKFVKLGSQ 298
D L+HK + IAL Q G NDR++A +D N+DL + SVK + + +KLG+
Sbjct: 451 LGDGKF--LSHKNEILEIALDQKGLTNDRKIAFIDKNRDLCITSVKRFGKEEQIIKLGTM 508
Query: 299 VLSVVWSSETELLVGLRANAIVAWCCPRAVQLDWLVL--TTVSKEVTDLGRNPCILSEED 356
V ++ W+ +L GL+ + W P V +D +L T ++ ++ +NP I+S
Sbjct: 509 VHTLAWNDTCNILCGLQDTRFIVWYYPNTVYVDRDILPKTLYERDASEFSKNPHIVSFVG 568
Query: 357 GIVRICKGNGSVVHISIAAFQEKLLKYVSTNMWQDALQLCRTVEDETLWACLAVLAWQHH 416
V I + +GS+VHISI + L +YVS++ W+DA++LCR V+++T+WACLA +A +
Sbjct: 569 NQVTIRRADGSLVHISITPYPAILHEYVSSSKWEDAVRLCRFVKEQTMWACLAAMAVANR 628
Query: 417 QLPVAEEAFALIRQYHQVCYIQHLR 441
+ AE A+A I + +V YI ++
Sbjct: 629 DMTTAEIAYAAIGEIDKVQYINSIK 653
>BC101494-1|AAI01495.1| 777|Homo sapiens intraflagellar transport
80 homolog (Chlamydomonas) protein.
Length = 777
Score = 392 bits (964), Expect = e-108
Identities = 183/445 (41%), Positives = 292/445 (65%), Gaps = 10/445 (2%)
Query: 2 IWDTFGQQISVSVKHDQPITSVSWSPAGDMFVAGSFNLTRLCNANGWSYCLDRPATGSIY 61
+WD++G+ + S H+ PITSV+W+P G++F GSF+ RLC+ GWSY L++P TGSI+
Sbjct: 214 VWDSYGRPLYNSQPHEHPITSVAWAPDGELFAVGSFHTLRLCDKTGWSYALEKPNTGSIF 273
Query: 62 DIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQIGRKVISIKDIVSEENDQLDY 121
+IAWS+DGTQ+A AC NGHV+FAH++++ + WKN+ T R+ + +++++++ D L++
Sbjct: 274 NIAWSIDGTQIAGACGNGHVVFAHVVEQHWEWKNFQVTLTKRRAMQVRNVLNDAVDLLEF 333
Query: 122 PDRVIQISLGFNHLVVATVKQCFIHKLSSWNTPVTFDLKEGTVSMILLSERCLCVVERAG 181
DRVI+ SL + HLVV+T QC++ +WNTP+ FDLKEGTVS+IL +ER +V+ +
Sbjct: 334 RDRVIKASLNYAHLVVSTSLQCYVFSTKNWNTPIIFDLKEGTVSLILQAERHFLLVDGSS 393
Query: 182 ISVYSYMGRLLASPRCGG-RSETLGKSSVSLGPDTLAVVDQTDRKLIHVFDLPTGLIVRS 240
I +YSY GR ++SP+ G R++ L +VSL DT+A+ D+ D K+I +F+ TG +
Sbjct: 394 IYLYSYEGRFISSPKFPGMRTDILNAQTVSLSNDTIAIRDKADEKIIFLFEASTG---KP 450
Query: 241 STDSTVTKLNHKMTVSTIALSQTGPINDRQMALLDYNKDLYVVSVK--DVKPKFVKLGSQ 298
D L+HK + IAL Q G NDR++A +D N+DL + SVK + + +KLG+
Sbjct: 451 LGDGKF--LSHKNEILEIALDQKGLTNDRKIAFIDKNRDLCITSVKRFGKEEQIIKLGTM 508
Query: 299 VLSVVWSSETELLVGLRANAIVAWCCPRAVQLDWLVL--TTVSKEVTDLGRNPCILSEED 356
V ++ W+ +L GL+ + W P V +D +L T ++ ++ +NP I+S
Sbjct: 509 VHTLAWNDTCNILCGLQDTRFIVWYYPNTVYVDRDILPKTLYERDASEFSKNPHIVSFVG 568
Query: 357 GIVRICKGNGSVVHISIAAFQEKLLKYVSTNMWQDALQLCRTVEDETLWACLAVLAWQHH 416
V I + +GS+VHISI + L +YVS++ W+DA++LCR V+++T+WACLA +A +
Sbjct: 569 NQVTIRRADGSLVHISITPYPAILHEYVSSSKWEDAVRLCRFVKEQTMWACLAAMAVANR 628
Query: 417 QLPVAEEAFALIRQYHQVCYIQHLR 441
+ AE A+A I + +V YI ++
Sbjct: 629 DMTTAEIAYAAIGEIDKVQYINSIK 653
>AB037795-1|BAA92612.1| 764|Homo sapiens KIAA1374 protein protein.
Length = 764
Score = 392 bits (964), Expect = e-108
Identities = 183/445 (41%), Positives = 292/445 (65%), Gaps = 10/445 (2%)
Query: 2 IWDTFGQQISVSVKHDQPITSVSWSPAGDMFVAGSFNLTRLCNANGWSYCLDRPATGSIY 61
+WD++G+ + S H+ PITSV+W+P G++F GSF+ RLC+ GWSY L++P TGSI+
Sbjct: 201 VWDSYGRPLYNSQPHEHPITSVAWAPDGELFAVGSFHTLRLCDKTGWSYALEKPNTGSIF 260
Query: 62 DIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQIGRKVISIKDIVSEENDQLDY 121
+IAWS+DGTQ+A AC NGHV+FAH++++ + WKN+ T R+ + +++++++ D L++
Sbjct: 261 NIAWSIDGTQIAGACGNGHVVFAHVVEQHWEWKNFQVTLTKRRAMQVRNVLNDAVDLLEF 320
Query: 122 PDRVIQISLGFNHLVVATVKQCFIHKLSSWNTPVTFDLKEGTVSMILLSERCLCVVERAG 181
DRVI+ SL + HLVV+T QC++ +WNTP+ FDLKEGTVS+IL +ER +V+ +
Sbjct: 321 RDRVIKASLNYAHLVVSTSLQCYVFSTKNWNTPIIFDLKEGTVSLILQAERHFLLVDGSS 380
Query: 182 ISVYSYMGRLLASPRCGG-RSETLGKSSVSLGPDTLAVVDQTDRKLIHVFDLPTGLIVRS 240
I +YSY GR ++SP+ G R++ L +VSL DT+A+ D+ D K+I +F+ TG +
Sbjct: 381 IYLYSYEGRFISSPKFPGMRTDILNAQTVSLSNDTIAIRDKADEKIIFLFEASTG---KP 437
Query: 241 STDSTVTKLNHKMTVSTIALSQTGPINDRQMALLDYNKDLYVVSVK--DVKPKFVKLGSQ 298
D L+HK + IAL Q G NDR++A +D N+DL + SVK + + +KLG+
Sbjct: 438 LGDGKF--LSHKNEILEIALDQKGLTNDRKIAFIDKNRDLCITSVKRFGKEEQIIKLGTM 495
Query: 299 VLSVVWSSETELLVGLRANAIVAWCCPRAVQLDWLVL--TTVSKEVTDLGRNPCILSEED 356
V ++ W+ +L GL+ + W P V +D +L T ++ ++ +NP I+S
Sbjct: 496 VHTLAWNDTCNILCGLQDTRFIVWYYPNTVYVDRDILPKTLYERDASEFSKNPHIVSFVG 555
Query: 357 GIVRICKGNGSVVHISIAAFQEKLLKYVSTNMWQDALQLCRTVEDETLWACLAVLAWQHH 416
V I + +GS+VHISI + L +YVS++ W+DA++LCR V+++T+WACLA +A +
Sbjct: 556 NQVTIRRADGSLVHISITPYPAILHEYVSSSKWEDAVRLCRFVKEQTMWACLAAMAVANR 615
Query: 417 QLPVAEEAFALIRQYHQVCYIQHLR 441
+ AE A+A I + +V YI ++
Sbjct: 616 DMTTAEIAYAAIGEIDKVQYINSIK 640
>BC042027-1|AAH42027.1| 536|Homo sapiens IFT80 protein protein.
Length = 536
Score = 359 bits (882), Expect = 2e-98
Identities = 171/417 (41%), Positives = 271/417 (64%), Gaps = 10/417 (2%)
Query: 30 DMFVAGSFNLTRLCNANGWSYCLDRPATGSIYDIAWSMDGTQLAAACANGHVIFAHIIDR 89
D+F GSF+ RLC+ GWSY L++P TGSI++IAWS+DGTQ+A AC NGHV+FAH++++
Sbjct: 1 DLFAVGSFHTLRLCDKTGWSYALEKPNTGSIFNIAWSIDGTQIAGACGNGHVVFAHVVEQ 60
Query: 90 EYTWKNYSCTQIGRKVISIKDIVSEENDQLDYPDRVIQISLGFNHLVVATVKQCFIHKLS 149
+ WKN+ T R+ + +++++++ D L++ DRVI+ SL + HLVV+T QC++
Sbjct: 61 HWEWKNFQVTLTKRRAMQVRNVLNDAVDLLEFRDRVIKASLNYAHLVVSTSLQCYVFSTK 120
Query: 150 SWNTPVTFDLKEGTVSMILLSERCLCVVERAGISVYSYMGRLLASPRCGG-RSETLGKSS 208
+WNTP+ FDLKEGTVS+IL +ER +V+ + I +YSY GR ++SP+ G R++ L +
Sbjct: 121 NWNTPIIFDLKEGTVSLILQAERHFLLVDGSSIYLYSYEGRFISSPKFPGMRTDILNAQT 180
Query: 209 VSLGPDTLAVVDQTDRKLIHVFDLPTGLIVRSSTDSTVTKLNHKMTVSTIALSQTGPIND 268
VSL DT+A+ D+ D K+I +F+ TG + D L+HK + IAL Q G ND
Sbjct: 181 VSLSNDTIAIRDKADEKIIFLFEASTG---KPLGDGKF--LSHKNEILEIALDQKGLTND 235
Query: 269 RQMALLDYNKDLYVVSVK--DVKPKFVKLGSQVLSVVWSSETELLVGLRANAIVAWCCPR 326
R++A +D N+DL + SVK + + +KLG+ V ++ W+ +L GL+ + W P
Sbjct: 236 RKIAFIDKNRDLCITSVKRFGKEEQIIKLGTMVHTLAWNDTCNILCGLQDTRFIVWYYPN 295
Query: 327 AVQLDWLVL--TTVSKEVTDLGRNPCILSEEDGIVRICKGNGSVVHISIAAFQEKLLKYV 384
V +D +L T ++ ++ +NP I+S V I + +GS+VHISI + L +YV
Sbjct: 296 TVYVDRDILPKTLYERDASEFSKNPHIVSFVGNQVTIRRADGSLVHISITPYPAILHEYV 355
Query: 385 STNMWQDALQLCRTVEDETLWACLAVLAWQHHQLPVAEEAFALIRQYHQVCYIQHLR 441
S++ W+DA++LCR V+++T+WACLA +A + + AE A+A I + +V YI ++
Sbjct: 356 SSSKWEDAVRLCRFVKEQTMWACLAAMAVANRDMTTAEIAYAAIGEIDKVQYINSIK 412
>BC130473-1|AAI30474.1| 522|Homo sapiens transducin (beta)-like
1Y-linked protein.
Length = 522
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G +KH +P+ SV++SP G +GSF+ + N S TG
Sbjct: 436 LWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGG 495
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 496 IFEVCWNARGDKVGASASDGSV 517
>BC130471-1|AAI30472.1| 522|Homo sapiens transducin (beta)-like
1Y-linked protein.
Length = 522
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G +KH +P+ SV++SP G +GSF+ + N S TG
Sbjct: 436 LWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGG 495
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 496 IFEVCWNARGDKVGASASDGSV 517
>AF332222-1|AAK13474.1| 522|Homo sapiens transducin beta-like 1
protein.
Length = 522
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G +KH +P+ SV++SP G +GSF+ + N S TG
Sbjct: 436 LWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGG 495
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 496 IFEVCWNARGDKVGASASDGSV 517
>AF332221-1|AAK13473.1| 522|Homo sapiens transducin beta-like 1
protein.
Length = 522
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G +KH +P+ SV++SP G +GSF+ + N S TG
Sbjct: 436 LWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGG 495
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 496 IFEVCWNARGDKVGASASDGSV 517
>AF332220-1|AAK13472.1| 522|Homo sapiens transducin beta-like 1
protein.
Length = 522
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G +KH +P+ SV++SP G +GSF+ + N S TG
Sbjct: 436 LWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGG 495
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 496 IFEVCWNARGDKVGASASDGSV 517
>BC113421-1|AAI13422.1| 514|Homo sapiens transducin (beta)-like
1X-linked receptor 1 protein.
Length = 514
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G I KH +P+ SV++SP G +GSF+ + N + TG
Sbjct: 426 LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG 485
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 486 IFEVCWNAAGDKVGASASDGSV 507
>AK022956-1|BAB14331.1| 514|Homo sapiens protein ( Homo sapiens
cDNA FLJ12894 fis, clone NT2RP2004170, moderately
similar to Homo sapiens mRNA for transducin (beta) like
1 protein. ).
Length = 514
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G I KH +P+ SV++SP G +GSF+ + N + TG
Sbjct: 426 LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG 485
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 486 IFEVCWNAAGDKVGASASDGSV 507
>AF314544-1|AAK00301.1| 514|Homo sapiens nuclear receptor
co-repressor/HDAC3 complex subunit TBLR1 protein.
Length = 514
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G I KH +P+ SV++SP G +GSF+ + N + TG
Sbjct: 426 LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG 485
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 486 IFEVCWNAAGDKVGASASDGSV 507
>AF268193-1|AAG44736.1| 514|Homo sapiens IRA1 protein.
Length = 514
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G I KH +P+ SV++SP G +GSF+ + N + TG
Sbjct: 426 LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG 485
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 486 IFEVCWNAAGDKVGASASDGSV 507
>Y12781-1|CAA73319.1| 577|Homo sapiens transducin (beta) like 1
protein protein.
Length = 577
Score = 46.0 bits (104), Expect = 3e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G KH +P+ SV++SP G +GSF+ + N + TG
Sbjct: 489 LWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGG 548
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 549 IFEVCWNARGDKVGASASDGSV 570
>BC052304-1|AAH52304.1| 577|Homo sapiens transducin (beta)-like
1X-linked protein.
Length = 577
Score = 46.0 bits (104), Expect = 3e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G KH +P+ SV++SP G +GSF+ + N + TG
Sbjct: 489 LWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGG 548
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 549 IFEVCWNARGDKVGASASDGSV 570
>BC032708-1|AAH32708.1| 526|Homo sapiens TBL1X protein protein.
Length = 526
Score = 46.0 bits (104), Expect = 3e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G KH +P+ SV++SP G +GSF+ + N + TG
Sbjct: 438 LWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGG 497
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 498 IFEVCWNARGDKVGASASDGSV 519
>AB209608-1|BAD92845.1| 540|Homo sapiens transducin beta-like 1X
variant protein.
Length = 540
Score = 46.0 bits (104), Expect = 3e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 2 IWDTF-GQQISVSVKHDQPITSVSWSPAGDMFVAGSFN-LTRLCNANGWSYCLDRPATGS 59
+WD G KH +P+ SV++SP G +GSF+ + N + TG
Sbjct: 452 LWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGG 511
Query: 60 IYDIAWSMDGTQLAAACANGHV 81
I+++ W+ G ++ A+ ++G V
Sbjct: 512 IFEVCWNARGDKVGASASDGSV 533
>BC012075-1|AAH12075.1| 485|Homo sapiens notchless homolog 1
(Drosophila) protein.
Length = 485
Score = 38.3 bits (85), Expect = 0.056
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 16 HDQPITSVSWSPAGDMFVAGSFNLTRLCNANGWSYCLDRP---ATGS---IYDIAWSMDG 69
H + + SV++SP G +GS + T W + P G + I+WS DG
Sbjct: 113 HSEAVISVAFSPTGKYLASGSGDTT----VRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 70 TQLAAACANGHVI 82
+LA+ C NG ++
Sbjct: 169 KKLASGCKNGQIL 181
>BC002884-1|AAH02884.2| 484|Homo sapiens NLE1 protein protein.
Length = 484
Score = 38.3 bits (85), Expect = 0.056
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 16 HDQPITSVSWSPAGDMFVAGSFNLTRLCNANGWSYCLDRP---ATGS---IYDIAWSMDG 69
H + + SV++SP G +GS + T W + P G + I+WS DG
Sbjct: 112 HSEAVISVAFSPTGKYLASGSGDTT----VRFWDLSTETPHFTCKGHRHWVLSISWSPDG 167
Query: 70 TQLAAACANGHVI 82
+LA+ C NG ++
Sbjct: 168 KKLASGCKNGQIL 180
>AK001320-1|BAA91621.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ10458 fis, clone NT2RP1001457, highly similar to
Homo sapiens partial mRNA for beta-transducin family
protein. ).
Length = 485
Score = 38.3 bits (85), Expect = 0.056
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 16 HDQPITSVSWSPAGDMFVAGSFNLTRLCNANGWSYCLDRP---ATGS---IYDIAWSMDG 69
H + + SV++SP G +GS + T W + P G + I+WS DG
Sbjct: 113 HSEAVISVAFSPTGKYLASGSGDTT----VRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 70 TQLAAACANGHVI 82
+LA+ C NG ++
Sbjct: 169 KKLASGCKNGQIL 181
>AB209111-1|BAD92348.1| 487|Homo sapiens Notchless gene homolog
variant protein.
Length = 487
Score = 38.3 bits (85), Expect = 0.056
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 16 HDQPITSVSWSPAGDMFVAGSFNLTRLCNANGWSYCLDRP---ATGS---IYDIAWSMDG 69
H + + SV++SP G +GS + T W + P G + I+WS DG
Sbjct: 115 HSEAVISVAFSPTGKYLASGSGDTT----VRFWDLSTETPHFTCKGHRHWVLSISWSPDG 170
Query: 70 TQLAAACANGHVI 82
+LA+ C NG ++
Sbjct: 171 KKLASGCKNGQIL 183
>BC117291-1|AAI17292.1| 925|Homo sapiens coronin 7 protein.
Length = 925
Score = 35.9 bits (79), Expect = 0.30
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 11 SVSVKHDQPITSVSWSP-AGDMFVAGSFNLT-RLCNANGWSYCLDRPA-TGSIYDIAWSM 67
+V H + I S+ + P A ++ + S++LT R+ + + L I+ +AWS
Sbjct: 588 TVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAWSP 647
Query: 68 DGTQLAAACANGHV 81
DG QLA C +G V
Sbjct: 648 DGQQLATVCKDGRV 661
>BC117289-1|AAI17290.1| 925|Homo sapiens coronin 7 protein.
Length = 925
Score = 35.9 bits (79), Expect = 0.30
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 11 SVSVKHDQPITSVSWSP-AGDMFVAGSFNLT-RLCNANGWSYCLDRPA-TGSIYDIAWSM 67
+V H + I S+ + P A ++ + S++LT R+ + + L I+ +AWS
Sbjct: 588 TVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAWSP 647
Query: 68 DGTQLAAACANGHV 81
DG QLA C +G V
Sbjct: 648 DGQQLATVCKDGRV 661
>AK025674-1|BAB15211.1| 925|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22021 fis, clone HEP08253. ).
Length = 925
Score = 35.9 bits (79), Expect = 0.30
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 11 SVSVKHDQPITSVSWSP-AGDMFVAGSFNLT-RLCNANGWSYCLDRPA-TGSIYDIAWSM 67
+V H + I S+ + P A ++ + S++LT R+ + + L I+ +AWS
Sbjct: 588 TVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAWSP 647
Query: 68 DGTQLAAACANGHV 81
DG QLA C +G V
Sbjct: 648 DGQQLATVCKDGRV 661
>U63810-1|AAC24948.1| 339|Homo sapiens WD40 protein Ciao 1 protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.92
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 2 IWDTFGQQ-ISVSVK---HDQPITSVSWSPAGDMFVAGSFNLTR-LCNANGWSY-CLD-- 53
IW T G I SV H + + V+WSP G+ + SF+ T + N + C+
Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101
Query: 54 RPATGSIYDIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQI-GRKVISIKDIV 112
+ +AW+ G L A C+ ++ +D E Y C + +K +V
Sbjct: 102 EGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEE---DEYECVSVLNSHTQDVKHVV 157
Query: 113 SEENDQL 119
+ +L
Sbjct: 158 WHPSQEL 164
>EF011618-1|ABK41108.1| 339|Homo sapiens CDW8/WDR39 protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.92
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 2 IWDTFGQQ-ISVSVK---HDQPITSVSWSPAGDMFVAGSFNLTR-LCNANGWSY-CLD-- 53
IW T G I SV H + + V+WSP G+ + SF+ T + N + C+
Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101
Query: 54 RPATGSIYDIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQI-GRKVISIKDIV 112
+ +AW+ G L A C+ ++ +D E Y C + +K +V
Sbjct: 102 EGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEE---DEYECVSVLNSHTQDVKHVV 157
Query: 113 SEENDQL 119
+ +L
Sbjct: 158 WHPSQEL 164
>CR456802-1|CAG33083.1| 339|Homo sapiens CIAO1 protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.92
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 2 IWDTFGQQ-ISVSVK---HDQPITSVSWSPAGDMFVAGSFNLTR-LCNANGWSY-CLD-- 53
IW T G I SV H + + V+WSP G+ + SF+ T + N + C+
Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101
Query: 54 RPATGSIYDIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQI-GRKVISIKDIV 112
+ +AW+ G L A C+ ++ +D E Y C + +K +V
Sbjct: 102 EGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEE---DEYECVSVLNSHTQDVKHVV 157
Query: 113 SEENDQL 119
+ +L
Sbjct: 158 WHPSQEL 164
>BC032812-1|AAH32812.1| 339|Homo sapiens cytosolic iron-sulfur
protein assembly 1 homolog (S. cerevisiae) protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.92
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 2 IWDTFGQQ-ISVSVK---HDQPITSVSWSPAGDMFVAGSFNLTR-LCNANGWSY-CLD-- 53
IW T G I SV H + + V+WSP G+ + SF+ T + N + C+
Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101
Query: 54 RPATGSIYDIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQI-GRKVISIKDIV 112
+ +AW+ G L A C+ ++ +D E Y C + +K +V
Sbjct: 102 EGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEE---DEYECVSVLNSHTQDVKHVV 157
Query: 113 SEENDQL 119
+ +L
Sbjct: 158 WHPSQEL 164
>BC013997-1|AAH13997.1| 353|Homo sapiens guanine nucleotide binding
protein (G protein), beta 5 protein.
Length = 353
Score = 34.3 bits (75), Expect = 0.92
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 1 MIWDT-FGQQISVSVKHDQPITSVSWSPAGDMFVAGSFNLT 40
M+WD GQ + H+ I SV + P+GD F +GS + T
Sbjct: 222 MVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDAT 262
>BC001395-1|AAH01395.1| 339|Homo sapiens cytosolic iron-sulfur
protein assembly 1 homolog (S. cerevisiae) protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.92
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 2 IWDTFGQQ-ISVSVK---HDQPITSVSWSPAGDMFVAGSFNLTR-LCNANGWSY-CLD-- 53
IW T G I SV H + + V+WSP G+ + SF+ T + N + C+
Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101
Query: 54 RPATGSIYDIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQI-GRKVISIKDIV 112
+ +AW+ G L A C+ ++ +D E Y C + +K +V
Sbjct: 102 EGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEE---DEYECVSVLNSHTQDVKHVV 157
Query: 113 SEENDQL 119
+ +L
Sbjct: 158 WHPSQEL 164
>AK223257-1|BAD96977.1| 339|Homo sapiens WD40 protein Ciao1 variant
protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.92
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 2 IWDTFGQQ-ISVSVK---HDQPITSVSWSPAGDMFVAGSFNLTR-LCNANGWSY-CLD-- 53
IW T G I SV H + + V+WSP G+ + SF+ T + N + C+
Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101
Query: 54 RPATGSIYDIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQI-GRKVISIKDIV 112
+ +AW+ G L A C+ ++ +D E Y C + +K +V
Sbjct: 102 EGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEE---DEYECVSVLNSHTQDVKHVV 157
Query: 113 SEENDQL 119
+ +L
Sbjct: 158 WHPSQEL 164
>AF501885-1|AAM15921.1| 353|Homo sapiens guanine nucleotide binding
protein beta 5 protein.
Length = 353
Score = 34.3 bits (75), Expect = 0.92
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 1 MIWDT-FGQQISVSVKHDQPITSVSWSPAGDMFVAGSFNLT 40
M+WD GQ + H+ I SV + P+GD F +GS + T
Sbjct: 222 MVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDAT 262
>AF300650-1|AAG18444.1| 395|Homo sapiens guanine nucleotide binding
protein beta subunit 5L protein.
Length = 395
Score = 34.3 bits (75), Expect = 0.92
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 1 MIWDT-FGQQISVSVKHDQPITSVSWSPAGDMFVAGSFNLT 40
M+WD GQ + H+ I SV + P+GD F +GS + T
Sbjct: 264 MVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDAT 304
>AF017656-1|AAC63826.1| 353|Homo sapiens G protein beta 5 subunit
protein.
Length = 353
Score = 34.3 bits (75), Expect = 0.92
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 1 MIWDT-FGQQISVSVKHDQPITSVSWSPAGDMFVAGSFNLT 40
M+WD GQ + H+ I SV + P+GD F +GS + T
Sbjct: 222 MVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDAT 262
>AC004020-1|AAC23493.1| 339|Homo sapiens Unknown gene product
protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.92
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 2 IWDTFGQQ-ISVSVK---HDQPITSVSWSPAGDMFVAGSFNLTR-LCNANGWSY-CLD-- 53
IW T G I SV H + + V+WSP G+ + SF+ T + N + C+
Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101
Query: 54 RPATGSIYDIAWSMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQI-GRKVISIKDIV 112
+ +AW+ G L A C+ ++ +D E Y C + +K +V
Sbjct: 102 EGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEE---DEYECVSVLNSHTQDVKHVV 157
Query: 113 SEENDQL 119
+ +L
Sbjct: 158 WHPSQEL 164
>AL133352-1|CAH73561.1| 1179|Homo sapiens Sec31 homolog B (S.
cerevisiae) protein.
Length = 1179
Score = 31.9 bits (69), Expect = 4.9
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 10/135 (7%)
Query: 2 IWDT--FGQQISVSVKHDQPITSVSWSPA-GDMFVAGSFNLTRLCNANGWSYCLDRPATG 58
+WD + V H + I SVSWS A ++ + + + LC G S + + T
Sbjct: 243 LWDLRFASSPLKVLESHSRGILSVSWSQADAELLLTSAKDSQILCRNLGSSEVVYKLPTQ 302
Query: 59 S--IYDIAW-SMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQIGRKVISIKDIVSEE 115
S +D+ W D + +AA NG + ++ R +W+ Q + IS +
Sbjct: 303 SSWCFDVQWCPRDPSVFSAASFNGWISLYSVMGR--SWEVQHMRQADK--ISSSFSKGQP 358
Query: 116 NDQLDYPDRVIQISL 130
L P++V Q L
Sbjct: 359 LPPLQVPEQVAQAPL 373
>AF274863-1|AAF78243.1| 1179|Homo sapiens secretory pathway
component Sec31B-1 protein.
Length = 1179
Score = 31.9 bits (69), Expect = 4.9
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 10/135 (7%)
Query: 2 IWDT--FGQQISVSVKHDQPITSVSWSPA-GDMFVAGSFNLTRLCNANGWSYCLDRPATG 58
+WD + V H + I SVSWS A ++ + + + LC G S + + T
Sbjct: 243 LWDLRFASSPLKVLESHSRGILSVSWSQADAELLLTSAKDSQILCRNLGSSEVVYKLPTQ 302
Query: 59 S--IYDIAW-SMDGTQLAAACANGHVIFAHIIDREYTWKNYSCTQIGRKVISIKDIVSEE 115
S +D+ W D + +AA NG + ++ R +W+ Q + IS +
Sbjct: 303 SSWCFDVQWCPRDPSVFSAASFNGWISLYSVMGR--SWEVQHMRQADK--ISSSFSKGQP 358
Query: 116 NDQLDYPDRVIQISL 130
L P++V Q L
Sbjct: 359 LPPLQVPEQVAQAPL 373
>BC126381-1|AAI26382.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 31.1 bits (67), Expect = 8.5
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 16 HDQPITSVSWSP-AGDMFVAGSFNLTRLC--NANGWSYCLDRPATGSIYDIAWSMDGTQL 72
H P+ V+W+P D+F++ S + + N PAT +YD+AWS + +
Sbjct: 703 HKGPVYKVTWNPFCHDVFLSCSADWGVIIWQQENVKPSLSFYPATSVVYDVAWSPKSSYI 762
Query: 73 AAACANGHV 81
AA V
Sbjct: 763 FAAANENRV 771
>BC126379-1|AAI26380.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 31.1 bits (67), Expect = 8.5
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 16 HDQPITSVSWSP-AGDMFVAGSFNLTRLC--NANGWSYCLDRPATGSIYDIAWSMDGTQL 72
H P+ V+W+P D+F++ S + + N PAT +YD+AWS + +
Sbjct: 703 HKGPVYKVTWNPFCHDVFLSCSADWGVIIWQQENVKPSLSFYPATSVVYDVAWSPKSSYI 762
Query: 73 AAACANGHV 81
AA V
Sbjct: 763 FAAANENRV 771
>BC044569-1|AAH44569.1| 348|Homo sapiens SEC31B protein protein.
Length = 348
Score = 31.1 bits (67), Expect = 8.5
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 2 IWDT--FGQQISVSVKHDQPITSVSWSPA-GDMFVAGSFNLTRLCNANGWSYCLDRPATG 58
+WD + V H + I SVSWS A ++ + + + LC G S + + T
Sbjct: 242 LWDLRFASSPLKVLESHSRGILSVSWSQADAELLLTSAKDSQILCRNLGSSEVVYKLPTQ 301
Query: 59 S--IYDIAW-SMDGTQLAAACANGHVIFAHIIDREY 91
S +D+ W D + +AA NG + ++ R +
Sbjct: 302 SSWCFDVQWCPRDPSVFSAASFNGWISLYAVMGRSW 337
>BC034946-1|AAH34946.1| 348|Homo sapiens SEC31B protein protein.
Length = 348
Score = 31.1 bits (67), Expect = 8.5
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 2 IWDT--FGQQISVSVKHDQPITSVSWSPA-GDMFVAGSFNLTRLCNANGWSYCLDRPATG 58
+WD + V H + I SVSWS A ++ + + + LC G S + + T
Sbjct: 242 LWDLRFASSPLKVLESHSRGILSVSWSQADAELLLTSAKDSQILCRNLGSSEVVYKLPTQ 301
Query: 59 S--IYDIAW-SMDGTQLAAACANGHVIFAHIIDREY 91
S +D+ W D + +AA NG + ++ R +
Sbjct: 302 SSWCFDVQWCPRDPSVFSAASFNGWISLYAVMGRSW 337
>AL592161-2|CAH72705.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 31.1 bits (67), Expect = 8.5
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 16 HDQPITSVSWSP-AGDMFVAGSFNLTRLC--NANGWSYCLDRPATGSIYDIAWSMDGTQL 72
H P+ V+W+P D+F++ S + + N PAT +YD+AWS + +
Sbjct: 703 HKGPVYKVTWNPFCHDVFLSCSADWGVIIWQQENVKPSLSFYPATSVVYDVAWSPKSSYI 762
Query: 73 AAACANGHV 81
AA V
Sbjct: 763 FAAANENRV 771
>AL354978-2|CAH71842.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 31.1 bits (67), Expect = 8.5
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 16 HDQPITSVSWSP-AGDMFVAGSFNLTRLC--NANGWSYCLDRPATGSIYDIAWSMDGTQL 72
H P+ V+W+P D+F++ S + + N PAT +YD+AWS + +
Sbjct: 703 HKGPVYKVTWNPFCHDVFLSCSADWGVIIWQQENVKPSLSFYPATSVVYDVAWSPKSSYI 762
Query: 73 AAACANGHV 81
AA V
Sbjct: 763 FAAANENRV 771
>AL139216-3|CAI18872.1| 848|Homo sapiens WD repeat domain 78
protein.
Length = 848
Score = 31.1 bits (67), Expect = 8.5
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 16 HDQPITSVSWSP-AGDMFVAGSFNLTRLC--NANGWSYCLDRPATGSIYDIAWSMDGTQL 72
H P+ V+W+P D+F++ S + + N PAT +YD+AWS + +
Sbjct: 703 HKGPVYKVTWNPFCHDVFLSCSADWGVIIWQQENVKPSLSFYPATSVVYDVAWSPKSSYI 762
Query: 73 AAACANGHV 81
AA V
Sbjct: 763 FAAANENRV 771
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.133 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,132,151
Number of Sequences: 224733
Number of extensions: 2726010
Number of successful extensions: 5151
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 4965
Number of HSP's gapped (non-prelim): 176
length of query: 462
length of database: 73,234,838
effective HSP length: 93
effective length of query: 369
effective length of database: 52,334,669
effective search space: 19311492861
effective search space used: 19311492861
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 67 (31.1 bits)
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