GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003097-TA|BGIBMGA003097-PA|undefined
         (107 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   1.8  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   2.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   9.8  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    19   9.8  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 53  KPSTHGSATRQVVSGKIFKKCKSATFQID-GATYTIVKCNWHF 94
           K   H   + Q  + K+F KCKS   +      Y +VKC   F
Sbjct: 79  KALRHLPRSMQDSTKKLFNKCKSIQNEDPCEKAYQLVKCYVEF 121


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 64  VVSGKIFKKCKSATFQIDGATYTIVKC---NWHFGQAAF 99
           +VSG + ++C    + +     TIV C    W +G   F
Sbjct: 134 IVSGAMAERCNFKAYCLFSFLNTIVYCVPAGWIWGDQGF 172


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 38  DTSATHALVRREIASKPSTHGSATR 62
           DTS   + VR+  A+KP    + T+
Sbjct: 234 DTSMAKSFVRKVHATKPPKPQTKTK 258


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 21  ESVTPTDLSFEELRNKFDTSATHALVRREIASKPSTH 57
           + +   DL+F E+  +   +  + L+R      P T+
Sbjct: 381 QKIANGDLNFNEVNFRILNAPVNQLIRYTRCENPKTN 417


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.128    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,517
Number of Sequences: 429
Number of extensions: 898
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 107
length of database: 140,377
effective HSP length: 50
effective length of query: 57
effective length of database: 118,927
effective search space:  6778839
effective search space used:  6778839
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)