GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003075-TA|BGIBMGA003075-PA|undefined
         (165 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   0.88 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   0.88 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   2.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.2  

>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 49  LNQPGFWDAFKVLYLTPSKHKNNTPKY 75
           L  P F+  +K +     K+K N PKY
Sbjct: 412 LRDPVFFSIYKTILDYYHKYKENLPKY 438


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 49 LNQPGFWDAFKVLYLTPSKHKNNTPKY 75
          L  P F+  +K +     K+K N PKY
Sbjct: 38 LRDPVFFSIYKTILDYYHKYKENLPKY 64


>AF388659-3|AAK71993.1|  548|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform C
          protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 64 TPSKHKNNTPKYLATKKRQDRIKELMKKD 92
          +PS  ++ +P  L ++  QD  KE  K +
Sbjct: 37 SPSSSRSPSPSLLTSQPHQDHNKEKSKNN 65


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 1   MEGNYPDHGDGMGVYY 16
           +EGN  DH DG   Y+
Sbjct: 268 VEGNESDHNDGRLRYW 283


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.140    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,822
Number of Sequences: 429
Number of extensions: 1631
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 165
length of database: 140,377
effective HSP length: 53
effective length of query: 112
effective length of database: 117,640
effective search space: 13175680
effective search space used: 13175680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)