Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003046-TA|BGIBMGA003046-PA|IPR000595|Cyclic
nucleotide-binding, IPR005821|Ion transport
(696 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 132 7e-33
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 124 2e-30
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 43 7e-06
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 30 0.056
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 2.1
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 6.4
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 132 bits (320), Expect = 7e-33
Identities = 122/473 (25%), Positives = 219/473 (46%), Gaps = 44/473 (9%)
Query: 207 WLAADYFSDLVYLLDVAF-VKPRLMYLHEGFWVD-DPVETRKNYKRKVQYKFDVISLTPL 264
W+A + SD ++L+D+ + +M V DP K+Y R + D+IS PL
Sbjct: 121 WIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLR-TWFFLDLISSIPL 179
Query: 265 DVLYFYF---------------GTQKAILRFPRLLKLQTFWEFNQAMDRV---------- 299
D ++ F G ILR +LL L ++ + V
Sbjct: 180 DYIFLIFNQFQDFSESFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYFLN 239
Query: 300 LASPYVVRIGKTLCYIFYLIHLNACAYYAMSDHIGLGSNGWVYDNE--GIAYIRCFYFAT 357
+AS ++ RI +C + + H + C + + G SN WV NE ++ + +A
Sbjct: 240 MASVFM-RIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVAINELQDSFWLEQYSWAL 298
Query: 358 KTATS----IGKNPKPENTIEYLYMTA-AWLMGVFVFALLIGQIRDIIATATRARTEYRK 412
A S IG P ++ +++T + + G +AL +G ++I + +R +YR+
Sbjct: 299 FKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYRE 358
Query: 413 ALDGCARYLRRLNLPAALQRRVTLWFNYTWSQQRCFDEAKILNWLPSNMKRDVALAVHMS 472
+ Y+ LP +++R+T +F + + Q + FDE IL L ++ DV S
Sbjct: 359 KVKQVEEYMAYRKLPREMRQRITEYFEHRY-QGKFFDEELILGELSEKLREDVINYNCRS 417
Query: 473 TLSKVQLFRDCSDSLLRDLVLQLRPVSFLPGDLVVRSGDVGHQMYIIKTGECCVMSQDET 532
++ V F + + + D+V +LR F PGD++++ G +G +MY I+ G ++ +
Sbjct: 418 LVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMAN-G 476
Query: 533 EVLATLREGSVFGEISLLGIEGLRRRTATVRSRGYSSLFALSRSDLDAALEYHKEAAKVL 592
EV +L +GS FGEI LL RR A+VR+ Y +LF+LS +A L+ + + +
Sbjct: 477 EVATSLSDGSYFGEICLL---TNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTM 533
Query: 593 RIRADQIIRENAARQTKQRLAALEARKSAELAKRQESALRRKSTVSGHSNATE 645
A + R N + +A E +E +K + + + + H++A+E
Sbjct: 534 ESVAAE--RLNKIGKNPNLVAHREEDLGSE-SKTINAVVNALAEQAAHASASE 583
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 124 bits (299), Expect = 2e-30
Identities = 92/347 (26%), Positives = 170/347 (48%), Gaps = 15/347 (4%)
Query: 306 VRIGKTLCYIFYLIHLNACAYYAMSDHIGLGSNGWVYDNE--GIAYIRCFYFATKTATS- 362
+RI +C + + H + C + + G SN WV NE ++ + +A A S
Sbjct: 277 MRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVAINELQDSFWLEQYSWALFKAMSH 336
Query: 363 ---IGKNPKPENTIEYLYMTA-AWLMGVFVFALLIGQIRDIIATATRARTEYRKALDGCA 418
IG P ++ +++T + + G +AL +G ++I + +R +YR+ +
Sbjct: 337 MLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVE 396
Query: 419 RYLRRLNLPAALQRRVTLWFNYTWSQQRCFDEAKILNWLPSNMKRDVALAVHMSTLSKVQ 478
Y+ LP +++R+T +F + + Q + FDE IL L ++ DV S ++ V
Sbjct: 397 EYMAYRKLPREMRQRITEYFEHRY-QGKFFDEELILGELSEKLREDVINYNCRSLVASVP 455
Query: 479 LFRDCSDSLLRDLVLQLRPVSFLPGDLVVRSGDVGHQMYIIKTGECCVMSQDETEVLATL 538
F + + + D+V +LR F PGD++++ G +G +MY I+ G ++ + EV +L
Sbjct: 456 FFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMAN-GEVATSL 514
Query: 539 REGSVFGEISLLGIEGLRRRTATVRSRGYSSLFALSRSDLDAALEYHKEAAKVLRIRADQ 598
+GS FGEI LL RR A+VR+ Y +LF+LS +A L+ + + + A +
Sbjct: 515 SDGSYFGEICLL---TNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMESVAAE 571
Query: 599 IIRENAARQTKQRLAALEARKSAELAKRQESALRRKSTVSGHSNATE 645
R N + +A E +E +K + + + + H++A+E
Sbjct: 572 --RLNKIGKNPNLVAHREEDLGSE-SKTINAVVNALAEQAAHASASE 615
Score = 30.3 bits (65), Expect = 0.056
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 207 WLAADYFSDLVYLLDVAF-VKPRLMYLHEGFWVD-DPVETRKNYKRKVQYKFDVISLTPL 264
W+A + SD ++L+D+ + +M V DP K+Y R + D+IS PL
Sbjct: 121 WIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLR-TWFFLDLISSIPL 179
Query: 265 DVLYFYF 271
D ++ F
Sbjct: 180 DYIFLIF 186
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 43.2 bits (97), Expect = 7e-06
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 499 SFLPGDLVVRSGDVGHQMYIIKTGECCVMSQDETEVLATLREGSVFGEISLLGIEGLRRR 558
SF G ++R GDVG +Y+++ G+ V S+D + L+TL G V GE+++L +R
Sbjct: 122 SFSAGSTIIREGDVGSIVYVMEEGKVEV-SRD-GKYLSTLAPGKVLGELAIL---YNCKR 176
Query: 559 TATVRSRGYSSLFALSR 575
TAT+ + L+A+ R
Sbjct: 177 TATITAATDCQLWAIDR 193
Score = 36.3 bits (80), Expect = 8e-04
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 468 AVHMSTLSKVQLFRDCSDSLLRDLVLQLRPVSFLPGDLVVRSGDVGHQMYIIKTGECCV- 526
A + L V +F++ + L + L + GD ++R G G +II G+ V
Sbjct: 209 AEYTDFLKSVPIFKNLPEETLIKISDVLEETFYNNGDYIIRQGARGDTFFIISRGQVRVT 268
Query: 527 MSQDET---EVLATLREGSVFGEISLLG 551
+ Q +T + + TL +G FGE +L G
Sbjct: 269 IKQPDTPEEKYIRTLSKGDFFGEKALQG 296
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 30.3 bits (65), Expect = 0.056
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 207 WLAADYFSDLVYLLDVAF-VKPRLMYLHEGFWVD-DPVETRKNYKRKVQYKFDVISLTPL 264
W+A + SD ++L+D+ + +M V DP K+Y R + D+IS PL
Sbjct: 121 WIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLR-TWFFLDLISSIPL 179
Query: 265 DVLYFYF 271
D ++ F
Sbjct: 180 DYIFLIF 186
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 25.0 bits (52), Expect = 2.1
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 10 PSKDRQLQCLSKSSIAAPLAILHLQHTVHPSTSDRDAKYGTKTPLARGPYGSWCTPETSP 69
P K + QC + P+ + T P TS TK+ + R S C+ SP
Sbjct: 304 PRKSHESQCPMLQKLEKPV-LSSSTTTTSPMTS-------TKSTIVRNHLNSTCSVTNSP 355
Query: 70 IHHPTVFPLQKVRLFSTS 87
F L K R ST+
Sbjct: 356 HQKKLRFHLAKERKASTT 373
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.4 bits (48), Expect = 6.4
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 70 IHHPTVFPLQKVRLFSTSPPPDYISSIEDKKAITELKELKKN 111
++HP ++ QK R F+ + + + DK+A+ E +L K+
Sbjct: 50 VYHPELY--QKARTFNLV---ENLDNYNDKEAVNEFMQLLKH 86
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.322 0.135 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,406
Number of Sequences: 429
Number of extensions: 9704
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 9
length of query: 696
length of database: 140,377
effective HSP length: 62
effective length of query: 634
effective length of database: 113,779
effective search space: 72135886
effective search space used: 72135886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)
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