Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA003041-TA|BGIBMGA003041-PA|IPR005491|ENT
(995 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.43
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 27 0.76
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 25 2.3
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 25 3.1
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 25 4.0
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 24 5.3
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 24 5.3
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 24 5.3
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 24 7.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 23 9.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 9.3
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 0.43
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 265 KKTTETPPSPSKL-YNPNMQIEY-SRPPNTFQASYAQSILGS 304
K +TETPPS ++L YN N++ + S+PP + I+ S
Sbjct: 533 KSSTETPPSYNQLNYNENIERFFKSKPPVATMYGSDEEIINS 574
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 27.1 bits (57), Expect = 0.76
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 525 VMAKARTKSGADIRIPLIKFKNSGMKIVSESSQSTLPISKSAVMTATSQSVASSTIP 581
++ AR K+G + L ++ N +VS S S + IS+ + Q+V IP
Sbjct: 205 ILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQ-VIACVGQQNVEGKRIP 260
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 25.4 bits (53), Expect = 2.3
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 800 NSLHLDLGMSSDSDNEYMSTGHKTKSKRLVQEDNSRATPTGENSAL-YTSASA 851
+S+H D G ++ + S+ H SK QED A N + T ASA
Sbjct: 383 SSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASA 435
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 25.0 bits (52), Expect = 3.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 646 NGGDVSKIIMGKNVNQLLQASKVEQSDGSKSSGN 679
N +V+ I+G NVN L+ ++ SD ++ N
Sbjct: 561 NFNEVNFRILGANVNDLIMNTRCANSDNQNNNQN 594
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 24.6 bits (51), Expect = 4.0
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 727 DNRMTEETCNASSLDSTAESISSINPMEEPILSVIDKVHNKD---------PDAAKDSSS 777
D+ + E + S +A ++ I +PI + K HN++ + + DSSS
Sbjct: 674 DDTLLEVALSLGSEALSAATVRFIEAEPQPIGKALSKCHNRNVTTCNMFRKTNLSGDSSS 733
Query: 778 ATDWEIELDTVS 789
T +ELD ++
Sbjct: 734 GTTLLLELDDIA 745
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 646 NGGDVSKIIMGKNVNQLLQASKVEQSDGSKS 676
N DV+ IM NVN+L+ ++ E D ++
Sbjct: 394 NFDDVNFRIMNANVNELILNTRCENPDNDRT 424
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 646 NGGDVSKIIMGKNVNQLLQASKVEQSDGSKS 676
N DV+ IM NVN+L+ ++ E D ++
Sbjct: 394 NFDDVNFRIMNANVNELILNTRCENPDNDRT 424
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 646 NGGDVSKIIMGKNVNQLLQASKVEQSDGSKS 676
N DV+ IM NVN+L+ ++ E D ++
Sbjct: 394 NFDDVNFRIMNANVNELILNTRCENPDNDRT 424
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.8 bits (49), Expect = 7.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 616 NPIVRPSSTKGSVIVVQKGTTLSKALAL 643
N ++RP S +VV+ G LS+ + L
Sbjct: 33 NRLIRPVSNNNDTVVVKLGLRLSQLIDL 60
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 23.4 bits (48), Expect = 9.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 646 NGGDVSKIIMGKNVNQLLQASKVEQSDGSKSSGN 679
N +V+ I+G NVN L++ ++ +S+ ++ N
Sbjct: 395 NFDEVNFRILGANVNNLIKNTRCAKSNNQNNNQN 428
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.4 bits (48), Expect = 9.3
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 191 ANQKHLNLSQIYSKLSQPAPVEHIRGKP--PGQSK 223
+ + LN+S I KL P P E + P GQ+K
Sbjct: 563 SGELRLNMSAIQFKLGHPEPPESVCSLPCEVGQAK 597
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.307 0.123 0.329
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,053
Number of Sequences: 429
Number of extensions: 8033
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 11
length of query: 995
length of database: 140,377
effective HSP length: 64
effective length of query: 931
effective length of database: 112,921
effective search space: 105129451
effective search space used: 105129451
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 48 (23.4 bits)
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