GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003016-TA|BGIBMGA003016-PA|IPR004245|Protein of unknown
function DUF229
         (438 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.95 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.95 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   5.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   5.1  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.4 bits (53), Expect = 0.95
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 289 YGSDRSISLFLPIPNNRTCNTAAIDDHWCTCHKSNRISINNKDV-YEPAFELVRNLNLL 346
           YG    ISL L +      N  A +  W T    +    +N+D+ Y    E+  NL +L
Sbjct: 66  YGQTNHISLTLDLEYELVENLQANEKPWSTLPIEDLTKSDNEDITYPTVLEVQLNLPIL 124


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 0.95
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 289 YGSDRSISLFLPIPNNRTCNTAAIDDHWCTCHKSNRISINNKDV-YEPAFELVRNLNLL 346
           YG    ISL L +      N  A +  W T    +    +N+D+ Y    E+  NL +L
Sbjct: 104 YGQTNHISLTLDLEYELVENLQANEKPWSTLPIEDLTKSDNEDITYPTVLEVQLNLPIL 162


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 69  DNCPFIWDWYKDAGYYTAFGEDSARLGTFNYEKLGFAASPTDYYIHTFMYEA 120
           +  P+ WD    AG+       +      NY+ L  AA   +YY H   +++
Sbjct: 422 ERTPYQWDNSTSAGFSQT--NKTWLPVNENYKSLNLAAQKREYYSHYVAFKS 471


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 149 IESLTRTLKNDKLFGFFWEVTMSHDYLNYPMLMDD 183
           ++ + R     K   F  EV + H+Y+N+ M MD+
Sbjct: 510 VKGMVRIFLGPKYDEFGHEVDLVHNYMNF-MQMDE 543


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 149 IESLTRTLKNDKLFGFFWEVTMSHDYLNYPMLMDD 183
           ++ + R     K   F  EV + H+Y+N+ M MD+
Sbjct: 136 VKGMVRIFLGPKYDEFGHEVDLVHNYMNF-MQMDE 169


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.139    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,152
Number of Sequences: 429
Number of extensions: 7240
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 5
length of query: 438
length of database: 140,377
effective HSP length: 60
effective length of query: 378
effective length of database: 114,637
effective search space: 43332786
effective search space used: 43332786
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)