GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA003013-TA|BGIBMGA003013-PA|IPR001478|PDZ/DHR/GLGF
         (172 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   4.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   8.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   8.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.6  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 2   SRSFDMKEEGNALIDDRGGIRRHQSMQRLQHGDQQTDESRAARVVSDHHGN 52
           SR  +   + N   +      RH S    Q+ +Q  D++  +   ++ H N
Sbjct: 412 SRCANFDNQDNNHYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNNRHNN 462


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 158 ILSGHYALREEVYQF 172
           +LSGHY    +VY F
Sbjct: 765 LLSGHYDSSVDVYAF 779


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 158 ILSGHYALREEVYQF 172
           +LSGHY    +VY F
Sbjct: 803 LLSGHYDSSVDVYAF 817


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/31 (19%), Positives = 17/31 (54%)

Query: 102 ILAVDGHRVEGMQHQDVARLIAESFAQRDKP 132
           +L++  + +  ++H+ +  +I  +F   D P
Sbjct: 500 VLSMSDYDISNIEHEALLLVITSTFGNGDPP 530


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 77  PLPRIINIHEHGAAYEAGGLEVGQLI 102
           PLP+ +    H A ++ G  E G LI
Sbjct: 505 PLPQHLPRIHHDAEWKVGNHEDGYLI 530


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 77  PLPRIINIHEHGAAYEAGGLEVGQLI 102
           PLP+ +    H A ++ G  E G LI
Sbjct: 420 PLPQHLPRIHHDAEWKVGNHEDGYLI 445


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 77  PLPRIINIHEHGAAYEAGGLEVGQLI 102
           PLP+ +    H A ++ G  E G LI
Sbjct: 739 PLPQHLPRIHHDAEWKVGNHEDGYLI 764


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.137    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,678
Number of Sequences: 429
Number of extensions: 1504
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 172
length of database: 140,377
effective HSP length: 54
effective length of query: 118
effective length of database: 117,211
effective search space: 13830898
effective search space used: 13830898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)