Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002995-TA|BGIBMGA002995-PA|IPR001699|Transcription
factor, T-box, IPR008967|p53-like transcription factor, DNA-binding
(170 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription fac... 73 4e-13
BC120946-1|AAI20947.1| 297|Homo sapiens T-box 20 protein. 53 4e-07
AJ237589-1|CAB51916.1| 200|Homo sapiens T-box transcription fac... 51 2e-06
AC006379-2|AAD21787.1| 251|Homo sapiens WUGSC:H_NH0456N16.2 pro... 51 2e-06
BC120945-1|AAI20946.1| 297|Homo sapiens TBX20 protein protein. 48 1e-05
BC122553-1|AAI22554.2| 496|Homo sapiens T-box 15 protein. 46 9e-05
AL357045-3|CAI43068.1| 496|Homo sapiens T-box 15 protein. 46 9e-05
AL357045-1|CAI43066.1| 602|Homo sapiens T-box 15 protein. 46 9e-05
AL139420-3|CAI22503.1| 602|Homo sapiens T-box 15 protein. 46 9e-05
BC132715-1|AAI32716.1| 607|Homo sapiens T-box 18 protein. 44 4e-04
BC040697-1|AAH40697.2| 306|Homo sapiens TBX18 protein protein. 44 4e-04
AL035694-1|CAD92511.1| 607|Homo sapiens T-box 18 protein. 44 4e-04
BC014194-1|AAH14194.2| 520|Homo sapiens T-box 22 protein. 40 0.003
AY035371-1|AAK63189.1| 520|Homo sapiens T-box transcription fac... 40 0.003
AL031000-2|CAI43070.1| 520|Homo sapiens T-box 22 protein. 40 0.003
AL031000-1|CAI43069.1| 400|Homo sapiens T-box 22 protein. 40 0.003
AF251684-1|AAG23749.1| 400|Homo sapiens TBXX T-box containing p... 40 0.003
AF216750-1|AAF61207.1| 596|Homo sapiens TBX3-iso protein. 40 0.003
BC025258-1|AAH25258.1| 743|Homo sapiens T-box 3 (ulnar mammary ... 40 0.004
AF170708-1|AAD50989.2| 722|Homo sapiens T-box protein TBX3 prot... 40 0.004
AF002228-1|AAC12947.1| 468|Homo sapiens tbx3 protein. 40 0.004
BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein. 40 0.006
U28049-1|AAA73861.1| 702|Homo sapiens TBX2 protein. 39 0.008
BC052566-1|AAH52566.1| 702|Homo sapiens T-box 2 protein. 39 0.008
AK022696-1|BAB14186.1| 938|Homo sapiens protein ( Homo sapiens ... 39 0.008
AB209378-1|BAD92615.1| 317|Homo sapiens T-box 2 variant protein. 39 0.008
BC026031-1|AAH26031.1| 436|Homo sapiens T-box 6 protein. 39 0.010
AJ007989-1|CAA07812.1| 436|Homo sapiens transcription factor TB... 39 0.010
BC039739-1|AAH39739.1| 535|Homo sapiens T-box 21 protein. 38 0.018
AK223634-1|BAD97354.1| 535|Homo sapiens T-box 21 variant protein. 38 0.018
AF241243-1|AAF61243.1| 535|Homo sapiens T-cell-specific T-box t... 38 0.018
AF093098-1|AAF00055.1| 535|Homo sapiens transcription factor TB... 38 0.018
U49250-1|AAA92010.1| 682|Homo sapiens T-Brain-1 protein. 36 0.054
BC113418-1|AAI13419.1| 682|Homo sapiens T-box, brain, 1 protein. 36 0.054
BC104844-1|AAI04845.1| 682|Homo sapiens T-box, brain, 1 protein. 36 0.054
BC029289-1|AAH29289.1| 572|Homo sapiens TBR1 protein protein. 36 0.054
BC025363-1|AAH25363.1| 390|Homo sapiens Similar to eomesodermin... 36 0.054
AK022330-1|BAB14014.1| 295|Homo sapiens protein ( Homo sapiens ... 36 0.054
AC009487-2|AAY15017.1| 682|Homo sapiens unknown protein. 36 0.054
AB031038-1|BAA83417.1| 686|Homo sapiens hTbr2 protein. 36 0.054
Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein. 36 0.071
U89353-1|AAC04619.1| 518|Homo sapiens transcription factor T-bo... 36 0.071
U80987-1|AAC51644.1| 349|Homo sapiens transcription factor TBX5... 36 0.071
BC027942-1|AAH27942.1| 518|Homo sapiens T-box 5 protein. 36 0.071
AJ010278-1|CAB37937.1| 182|Homo sapiens TBX18 protein protein. 36 0.071
AF221714-1|AAF34659.1| 518|Homo sapiens T-box 5 protein. 36 0.071
AB051068-1|BAB55448.1| 342|Homo sapiens transcription factor T-... 36 0.071
DQ650705-1|ABG25916.1| 372|Homo sapiens T-box 1 protein. 35 0.12
BC113487-1|AAI13488.1| 385|Homo sapiens T-box 10 protein. 35 0.12
BC113485-1|AAI13486.1| 385|Homo sapiens T-box 10 protein. 35 0.12
AY229977-1|AAO73483.1| 385|Homo sapiens transcription factor TB... 35 0.12
AF373867-1|AAK58955.1| 495|Homo sapiens T-box 1 transcription f... 35 0.12
AF033579-1|AAC23481.1| 211|Homo sapiens T-box-containing transc... 35 0.12
AF012131-1|AAB94019.1| 372|Homo sapiens brachyury protein. 35 0.12
AF012130-1|AAB94018.1| 398|Homo sapiens brachyury protein. 35 0.12
AF188703-1|AAF68854.1| 545|Homo sapiens T-box TBX4 protein. 34 0.22
AL009051-2|CAI22639.1| 317|Homo sapiens T-box 19 protein. 34 0.29
AJ010280-1|CAB37939.1| 166|Homo sapiens eomesodermin protein, E... 33 0.38
AJ010279-1|CAB37938.1| 139|Homo sapiens TBX6 protein protein. 33 0.50
BC093666-1|AAH93666.1| 448|Homo sapiens T-box 19 protein. 32 0.88
BC093664-1|AAH93664.1| 448|Homo sapiens T-box 19 protein. 32 0.88
AL009051-3|CAI22640.1| 448|Homo sapiens T-box 19 protein. 32 0.88
AJ010277-1|CAB37936.1| 448|Homo sapiens TBX19 protein protein. 32 0.88
AL009051-1|CAI22638.1| 280|Homo sapiens T-box 19 protein. 32 1.2
BC098425-1|AAH98425.1| 377|Homo sapiens T protein protein. 30 3.6
AL627443-2|CAI14269.1| 435|Homo sapiens T, brachyury homolog (m... 30 3.6
AJ001699-1|CAA04938.1| 435|Homo sapiens Brachyury (T) protein p... 30 3.6
>DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription factor
TBX20 isoform A protein.
Length = 447
Score = 73.3 bits (172), Expect = 4e-13
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 21 ITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLRPF 66
ITKLKIDSNPFAKGFRDSSRLT+ ERE++ES++ + Y RSP+R +
Sbjct: 272 ITKLKIDSNPFAKGFRDSSRLTDIERESVESLIQKHSYARSPIRTY 317
>BC120946-1|AAI20947.1| 297|Homo sapiens T-box 20 protein.
Length = 297
Score = 53.2 bits (122), Expect = 4e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 21 ITKLKIDSNPFAKGFRDSSRLTEFER 46
ITKLKIDSNPFAKGFRDSSRLT+ ER
Sbjct: 272 ITKLKIDSNPFAKGFRDSSRLTDIER 297
>AJ237589-1|CAB51916.1| 200|Homo sapiens T-box transcription factor
protein.
Length = 200
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 21 ITKLKIDSNPFAKGFRDSSRLTEFE 45
ITKLKIDSNPFAKGFRDSSRLT+ E
Sbjct: 176 ITKLKIDSNPFAKGFRDSSRLTDIE 200
>AC006379-2|AAD21787.1| 251|Homo sapiens WUGSC:H_NH0456N16.2
protein.
Length = 251
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 21 ITKLKIDSNPFAKGFRDSSRLTEFE 45
ITKLKIDSNPFAKGFRDSSRLT+ E
Sbjct: 227 ITKLKIDSNPFAKGFRDSSRLTDIE 251
>BC120945-1|AAI20946.1| 297|Homo sapiens TBX20 protein protein.
Length = 297
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 21 ITKLKIDSNPFAKGFRDSSRLT 42
ITKLKIDSNPFAKGFRDSSRLT
Sbjct: 272 ITKLKIDSNPFAKGFRDSSRLT 293
>BC122553-1|AAI22554.2| 496|Homo sapiens T-box 15 protein.
Length = 496
Score = 45.6 bits (103), Expect = 9e-05
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLR 64
QIT+LKID NPFAKGFRDS R R +E+++ + R P+R
Sbjct: 181 QITRLKIDRNPFAKGFRDSGR----NRTGLEAIMETYAFWRPPVR 221
>AL357045-3|CAI43068.1| 496|Homo sapiens T-box 15 protein.
Length = 496
Score = 45.6 bits (103), Expect = 9e-05
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLR 64
QIT+LKID NPFAKGFRDS R R +E+++ + R P+R
Sbjct: 181 QITRLKIDRNPFAKGFRDSGR----NRTGLEAIMETYAFWRPPVR 221
>AL357045-1|CAI43066.1| 602|Homo sapiens T-box 15 protein.
Length = 602
Score = 45.6 bits (103), Expect = 9e-05
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLR 64
QIT+LKID NPFAKGFRDS R R +E+++ + R P+R
Sbjct: 287 QITRLKIDRNPFAKGFRDSGR----NRTGLEAIMETYAFWRPPVR 327
>AL139420-3|CAI22503.1| 602|Homo sapiens T-box 15 protein.
Length = 602
Score = 45.6 bits (103), Expect = 9e-05
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLR 64
QIT+LKID NPFAKGFRDS R R +E+++ + R P+R
Sbjct: 287 QITRLKIDRNPFAKGFRDSGR----NRTGLEAIMETYAFWRPPVR 327
>BC132715-1|AAI32716.1| 607|Homo sapiens T-box 18 protein.
Length = 607
Score = 43.6 bits (98), Expect = 4e-04
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLR 64
QIT+LKID NPFAKGFRDS R R +E+++ + R LR
Sbjct: 313 QITRLKIDRNPFAKGFRDSGR----NRMGLEALVESYAFWRPSLR 353
>BC040697-1|AAH40697.2| 306|Homo sapiens TBX18 protein protein.
Length = 306
Score = 43.6 bits (98), Expect = 4e-04
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLR 64
QIT+LKID NPFAKGFRDS R R +E+++ + R LR
Sbjct: 229 QITRLKIDRNPFAKGFRDSGR----NRMGLEALVESYAFWRPSLR 269
>AL035694-1|CAD92511.1| 607|Homo sapiens T-box 18 protein.
Length = 607
Score = 43.6 bits (98), Expect = 4e-04
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLR 64
QIT+LKID NPFAKGFRDS R R +E+++ + R LR
Sbjct: 313 QITRLKIDRNPFAKGFRDSGR----NRMGLEALVESYAFWRPSLR 353
>BC014194-1|AAH14194.2| 520|Homo sapiens T-box 22 protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 20 QITKLKIDSNPFAKGFRDSSR 40
QITKLKI+ NPFAKGFRD+ R
Sbjct: 266 QITKLKIERNPFAKGFRDTGR 286
>AY035371-1|AAK63189.1| 520|Homo sapiens T-box transcription factor
TBX22 protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 20 QITKLKIDSNPFAKGFRDSSR 40
QITKLKI+ NPFAKGFRD+ R
Sbjct: 266 QITKLKIERNPFAKGFRDTGR 286
>AL031000-2|CAI43070.1| 520|Homo sapiens T-box 22 protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 20 QITKLKIDSNPFAKGFRDSSR 40
QITKLKI+ NPFAKGFRD+ R
Sbjct: 266 QITKLKIERNPFAKGFRDTGR 286
>AL031000-1|CAI43069.1| 400|Homo sapiens T-box 22 protein.
Length = 400
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 20 QITKLKIDSNPFAKGFRDSSR 40
QITKLKI+ NPFAKGFRD+ R
Sbjct: 146 QITKLKIERNPFAKGFRDTGR 166
>AF251684-1|AAG23749.1| 400|Homo sapiens TBXX T-box containing
protein protein.
Length = 400
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 20 QITKLKIDSNPFAKGFRDSSR 40
QITKLKI+ NPFAKGFRD+ R
Sbjct: 146 QITKLKIERNPFAKGFRDTGR 166
>AF216750-1|AAF61207.1| 596|Homo sapiens TBX3-iso protein.
Length = 596
Score = 40.3 bits (90), Expect = 0.003
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLRPFDLDQHNNNLTLEE 79
+IT+LKID+NPFAKGFRD+ RE + + + +R FD N T +E
Sbjct: 288 KITQLKIDNNPFAKGFRDTG---NGRREKRQQLTLQS------MRVFDERHKKENGTSDE 338
Query: 80 KAILAARSQLFLRAAYP 96
+ A F +A+ P
Sbjct: 339 SSSEQAAFNCFAQASSP 355
>BC025258-1|AAH25258.1| 743|Homo sapiens T-box 3 (ulnar mammary
syndrome) protein.
Length = 743
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLRPFDLDQHNNNLTLEE 79
+IT+LKID+NPFAKGFRD+ RE + + + +R FD N T +E
Sbjct: 288 KITQLKIDNNPFAKGFRDTG---NGRREKRKQLTLQS------MRVFDERHKKENGTSDE 338
Query: 80 KAILAARSQLFLRAAYP 96
+ A F +A+ P
Sbjct: 339 SSSEQAAFNCFAQASSP 355
>AF170708-1|AAD50989.2| 722|Homo sapiens T-box protein TBX3
protein.
Length = 722
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLRPFDLDQHNNNLTLEE 79
+IT+LKID+NPFAKGFRD+ RE + + + +R FD N T +E
Sbjct: 268 KITQLKIDNNPFAKGFRDTG---NGRREKRKQLTLQS------MRVFDERHKKENGTSDE 318
Query: 80 KAILAARSQLFLRAAYP 96
+ A F +A+ P
Sbjct: 319 SSSEQAAFNCFAQASSP 335
>AF002228-1|AAC12947.1| 468|Homo sapiens tbx3 protein.
Length = 468
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLRPFDLDQHNNNLTLEE 79
+IT+LKID+NPFAKGFRD+ RE + + + +R FD N T +E
Sbjct: 268 KITQLKIDNNPFAKGFRDTG---NGRREKRKQLTLQS------MRVFDERHKKENGTSDE 318
Query: 80 KAILAARSQLFLRAAYP 96
+ A F +A+ P
Sbjct: 319 SSSEQAAFNCFAQASSP 335
>BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein.
Length = 1139
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 13 ITVSVLFQITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQ 56
+T QIT+LKID NPFAKGFRD + +R+ + ++Q
Sbjct: 236 VTAYQNIQITQLKIDYNPFAKGFRDDGLNNKPQRDGKQKNSSDQ 279
>U28049-1|AAA73861.1| 702|Homo sapiens TBX2 protein.
Length = 702
Score = 39.1 bits (87), Expect = 0.008
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 20 QITKLKIDSNPFAKGFRD--SSRLTEFERETMESM-LAEQH 57
+IT+LKID+NPFAKGFRD + R + ++ T+ S+ L E+H
Sbjct: 260 KITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEH 300
>BC052566-1|AAH52566.1| 702|Homo sapiens T-box 2 protein.
Length = 702
Score = 39.1 bits (87), Expect = 0.008
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 20 QITKLKIDSNPFAKGFRD--SSRLTEFERETMESM-LAEQH 57
+IT+LKID+NPFAKGFRD + R + ++ T+ S+ L E+H
Sbjct: 260 KITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEH 300
>AK022696-1|BAB14186.1| 938|Homo sapiens protein ( Homo sapiens
cDNA FLJ12634 fis, clone NT2RM4001858, weakly similar
to T-BOX CONTAINING PROTEIN TBX6L. ).
Length = 938
Score = 39.1 bits (87), Expect = 0.008
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 13 ITVSVLFQITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQ 56
+T QIT+LKID NPFAKGFRD +R+ + ++Q
Sbjct: 40 VTAYQNIQITQLKIDYNPFAKGFRDDGLNNNPQRDGKQKNSSDQ 83
>AB209378-1|BAD92615.1| 317|Homo sapiens T-box 2 variant protein.
Length = 317
Score = 39.1 bits (87), Expect = 0.008
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 20 QITKLKIDSNPFAKGFRD--SSRLTEFERETMESM-LAEQH 57
+IT+LKID+NPFAKGFRD + R + ++ T+ S+ L E+H
Sbjct: 207 KITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEH 247
>BC026031-1|AAH26031.1| 436|Homo sapiens T-box 6 protein.
Length = 436
Score = 38.7 bits (86), Expect = 0.010
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERE 47
QIT+LKI +NPFAKGFR++ R + ER+
Sbjct: 256 QITQLKIAANPFAKGFRENGRNCKRERD 283
>AJ007989-1|CAA07812.1| 436|Homo sapiens transcription factor TBX6
protein.
Length = 436
Score = 38.7 bits (86), Expect = 0.010
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERE 47
QIT+LKI +NPFAKGFR++ R + ER+
Sbjct: 256 QITQLKIAANPFAKGFRENGRNCKRERD 283
>BC039739-1|AAH39739.1| 535|Homo sapiens T-box 21 protein.
Length = 535
Score = 37.9 bits (84), Expect = 0.018
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 2 HIFRHFKVRMWITVSVL--FQITKLKIDSNPFAKGFRDS 38
HIF F+ +I V+ +IT+LKID+NPFAKGFR++
Sbjct: 290 HIFT-FQETQFIAVTAYQNAEITQLKIDNNPFAKGFREN 327
>AK223634-1|BAD97354.1| 535|Homo sapiens T-box 21 variant protein.
Length = 535
Score = 37.9 bits (84), Expect = 0.018
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 2 HIFRHFKVRMWITVSVL--FQITKLKIDSNPFAKGFRDS 38
HIF F+ +I V+ +IT+LKID+NPFAKGFR++
Sbjct: 290 HIFT-FQETQFIAVTAYQNAEITQLKIDNNPFAKGFREN 327
>AF241243-1|AAF61243.1| 535|Homo sapiens T-cell-specific T-box
transcription factor T-bet protein.
Length = 535
Score = 37.9 bits (84), Expect = 0.018
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 2 HIFRHFKVRMWITVSVL--FQITKLKIDSNPFAKGFRDS 38
HIF F+ +I V+ +IT+LKID+NPFAKGFR++
Sbjct: 290 HIFT-FQETQFIAVTAYQNAEITQLKIDNNPFAKGFREN 327
>AF093098-1|AAF00055.1| 535|Homo sapiens transcription factor TBLYM
protein.
Length = 535
Score = 37.9 bits (84), Expect = 0.018
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 2 HIFRHFKVRMWITVSVL--FQITKLKIDSNPFAKGFRDS 38
HIF F+ +I V+ +IT+LKID+NPFAKGFR++
Sbjct: 290 HIFT-FQETQFIAVTAYQNAEITQLKIDNNPFAKGFREN 327
>U49250-1|AAA92010.1| 682|Homo sapiens T-Brain-1 protein.
Length = 682
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 21 ITKLKIDSNPFAKGFRDS 38
IT+LKID NPFAKGFRD+
Sbjct: 377 ITQLKIDHNPFAKGFRDN 394
>BC113418-1|AAI13419.1| 682|Homo sapiens T-box, brain, 1 protein.
Length = 682
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 21 ITKLKIDSNPFAKGFRDS 38
IT+LKID NPFAKGFRD+
Sbjct: 377 ITQLKIDHNPFAKGFRDN 394
>BC104844-1|AAI04845.1| 682|Homo sapiens T-box, brain, 1 protein.
Length = 682
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 21 ITKLKIDSNPFAKGFRDS 38
IT+LKID NPFAKGFRD+
Sbjct: 377 ITQLKIDHNPFAKGFRDN 394
>BC029289-1|AAH29289.1| 572|Homo sapiens TBR1 protein protein.
Length = 572
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 21 ITKLKIDSNPFAKGFRDS 38
IT+LKID NPFAKGFRD+
Sbjct: 377 ITQLKIDHNPFAKGFRDN 394
>BC025363-1|AAH25363.1| 390|Homo sapiens Similar to eomesodermin
homolog (Xenopus laevis) protein.
Length = 390
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 21 ITKLKIDSNPFAKGFRDS 38
IT+LKID NPFAKGFRD+
Sbjct: 144 ITQLKIDHNPFAKGFRDN 161
>AK022330-1|BAB14014.1| 295|Homo sapiens protein ( Homo sapiens
cDNA FLJ12268 fis, clone MAMMA1001627, highly similar to
Homo sapiens mRNA for transcription factor TBX6. ).
Length = 295
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/21 (71%), Positives = 19/21 (90%)
Query: 20 QITKLKIDSNPFAKGFRDSSR 40
QIT+LKI +NPFAKGFR++ R
Sbjct: 256 QITQLKIAANPFAKGFRENGR 276
>AC009487-2|AAY15017.1| 682|Homo sapiens unknown protein.
Length = 682
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 21 ITKLKIDSNPFAKGFRDS 38
IT+LKID NPFAKGFRD+
Sbjct: 377 ITQLKIDHNPFAKGFRDN 394
>AB031038-1|BAA83417.1| 686|Homo sapiens hTbr2 protein.
Length = 686
Score = 36.3 bits (80), Expect = 0.054
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 21 ITKLKIDSNPFAKGFRDS 38
IT+LKID NPFAKGFRD+
Sbjct: 440 ITQLKIDHNPFAKGFRDN 457
>Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein.
Length = 513
Score = 35.9 bits (79), Expect = 0.071
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMES 51
+IT+LKI++NPFAKGFR S + M+S
Sbjct: 218 KITQLKIENNPFAKGFRGSDDMELHRMSRMQS 249
>U89353-1|AAC04619.1| 518|Homo sapiens transcription factor T-box 5
protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.071
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMES 51
+IT+LKI++NPFAKGFR S + M+S
Sbjct: 221 KITQLKIENNPFAKGFRGSDDMELHRMSRMQS 252
>U80987-1|AAC51644.1| 349|Homo sapiens transcription factor TBX5
protein.
Length = 349
Score = 35.9 bits (79), Expect = 0.071
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMES 51
+IT+LKI++NPFAKGFR S + M+S
Sbjct: 221 KITQLKIENNPFAKGFRGSDDMELHRMSRMQS 252
>BC027942-1|AAH27942.1| 518|Homo sapiens T-box 5 protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.071
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMES 51
+IT+LKI++NPFAKGFR S + M+S
Sbjct: 221 KITQLKIENNPFAKGFRGSDDMELHRMSRMQS 252
>AJ010278-1|CAB37937.1| 182|Homo sapiens TBX18 protein protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.071
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 20 QITKLKIDSNPFAKGFR 36
QIT+LKID NPFAKGFR
Sbjct: 166 QITRLKIDRNPFAKGFR 182
>AF221714-1|AAF34659.1| 518|Homo sapiens T-box 5 protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.071
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMES 51
+IT+LKI++NPFAKGFR S + M+S
Sbjct: 221 KITQLKIENNPFAKGFRGSDDMELHRMSRMQS 252
>AB051068-1|BAB55448.1| 342|Homo sapiens transcription factor T-box
5 protein.
Length = 342
Score = 35.9 bits (79), Expect = 0.071
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMES 51
+IT+LKI++NPFAKGFR S + M+S
Sbjct: 171 KITQLKIENNPFAKGFRGSDDMELHRMSRMQS 202
>DQ650705-1|ABG25916.1| 372|Homo sapiens T-box 1 protein.
Length = 372
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 20 QITKLKIDSNPFAKGFRD 37
+IT+LKI SNPFAKGFRD
Sbjct: 280 RITQLKIASNPFAKGFRD 297
>BC113487-1|AAI13488.1| 385|Homo sapiens T-box 10 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/19 (78%), Positives = 18/19 (94%)
Query: 20 QITKLKIDSNPFAKGFRDS 38
+IT+LKI SNPFAKGFR+S
Sbjct: 235 RITQLKIASNPFAKGFRES 253
>BC113485-1|AAI13486.1| 385|Homo sapiens T-box 10 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/19 (78%), Positives = 18/19 (94%)
Query: 20 QITKLKIDSNPFAKGFRDS 38
+IT+LKI SNPFAKGFR+S
Sbjct: 235 RITQLKIASNPFAKGFRES 253
>AY229977-1|AAO73483.1| 385|Homo sapiens transcription factor TBX10
protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/19 (78%), Positives = 18/19 (94%)
Query: 20 QITKLKIDSNPFAKGFRDS 38
+IT+LKI SNPFAKGFR+S
Sbjct: 235 RITQLKIASNPFAKGFRES 253
>AF373867-1|AAK58955.1| 495|Homo sapiens T-box 1 transcription
factor C protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 20 QITKLKIDSNPFAKGFRD 37
+IT+LKI SNPFAKGFRD
Sbjct: 280 RITQLKIASNPFAKGFRD 297
>AF033579-1|AAC23481.1| 211|Homo sapiens T-box-containing
transcriptional activator protein.
Length = 211
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/19 (78%), Positives = 18/19 (94%)
Query: 20 QITKLKIDSNPFAKGFRDS 38
+IT+LKI SNPFAKGFR+S
Sbjct: 110 RITQLKIASNPFAKGFRES 128
>AF012131-1|AAB94019.1| 372|Homo sapiens brachyury protein.
Length = 372
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 20 QITKLKIDSNPFAKGFRD 37
+IT+LKI SNPFAKGFRD
Sbjct: 280 RITQLKIASNPFAKGFRD 297
>AF012130-1|AAB94018.1| 398|Homo sapiens brachyury protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 20 QITKLKIDSNPFAKGFRD 37
+IT+LKI SNPFAKGFRD
Sbjct: 280 RITQLKIASNPFAKGFRD 297
>AF188703-1|AAF68854.1| 545|Homo sapiens T-box TBX4 protein.
Length = 545
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/19 (73%), Positives = 18/19 (94%)
Query: 20 QITKLKIDSNPFAKGFRDS 38
+IT+LKI++NPFAKGFR S
Sbjct: 234 KITQLKIENNPFAKGFRGS 252
>AL009051-2|CAI22639.1| 317|Homo sapiens T-box 19 protein.
Length = 317
Score = 33.9 bits (74), Expect = 0.29
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPLRPFDLDQHN 72
+IT LKI NPFAK F D+ R+ E++ QH S L + +N
Sbjct: 133 EITALKIKYNPFAKAFLDAKERNHL-RDVPEAISESQHVTYSHLNLIESSSNN 184
>AJ010280-1|CAB37939.1| 166|Homo sapiens eomesodermin protein,
EOMES protein.
Length = 166
Score = 33.5 bits (73), Expect = 0.38
Identities = 14/16 (87%), Positives = 15/16 (93%)
Query: 21 ITKLKIDSNPFAKGFR 36
IT+LKID NPFAKGFR
Sbjct: 151 ITQLKIDHNPFAKGFR 166
>AJ010279-1|CAB37938.1| 139|Homo sapiens TBX6 protein protein.
Length = 139
Score = 33.1 bits (72), Expect = 0.50
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 20 QITKLKIDSNPFAKGFR 36
QIT+LKI +NPFAKGFR
Sbjct: 123 QITQLKIAANPFAKGFR 139
>BC093666-1|AAH93666.1| 448|Homo sapiens T-box 19 protein.
Length = 448
Score = 32.3 bits (70), Expect = 0.88
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPL 63
+IT LKI NPFAK F D+ R+ E++ QH S L
Sbjct: 201 EITALKIKYNPFAKAFLDAKERNHL-RDVPEAISESQHVTYSHL 243
>BC093664-1|AAH93664.1| 448|Homo sapiens T-box 19 protein.
Length = 448
Score = 32.3 bits (70), Expect = 0.88
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPL 63
+IT LKI NPFAK F D+ R+ E++ QH S L
Sbjct: 201 EITALKIKYNPFAKAFLDAKERNHL-RDVPEAISESQHVTYSHL 243
>AL009051-3|CAI22640.1| 448|Homo sapiens T-box 19 protein.
Length = 448
Score = 32.3 bits (70), Expect = 0.88
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPL 63
+IT LKI NPFAK F D+ R+ E++ QH S L
Sbjct: 201 EITALKIKYNPFAKAFLDAKERNHL-RDVPEAISESQHVTYSHL 243
>AJ010277-1|CAB37936.1| 448|Homo sapiens TBX19 protein protein.
Length = 448
Score = 32.3 bits (70), Expect = 0.88
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPL 63
+IT LKI NPFAK F D+ R+ E++ QH S L
Sbjct: 201 EITALKIKYNPFAKAFLDAKERNHL-RDVPEAISESQHVTYSHL 243
>AL009051-1|CAI22638.1| 280|Homo sapiens T-box 19 protein.
Length = 280
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETMESMLAEQHYLRSPL 63
+IT LKI NPFAK F D+ R+ E++ QH S L
Sbjct: 33 KITALKIKYNPFAKAFLDAKERNHL-RDVPEAISESQHVTYSHL 75
>BC098425-1|AAH98425.1| 377|Homo sapiens T protein protein.
Length = 377
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETME 50
+IT LKI NPFAK F D+ ++ +E ME
Sbjct: 202 EITALKIKYNPFAKAFLDAKERSD-HKEMME 231
>AL627443-2|CAI14269.1| 435|Homo sapiens T, brachyury homolog
(mouse) protein.
Length = 435
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETME 50
+IT LKI NPFAK F D+ ++ +E ME
Sbjct: 202 EITALKIKYNPFAKAFLDAKERSD-HKEMME 231
>AJ001699-1|CAA04938.1| 435|Homo sapiens Brachyury (T) protein
protein.
Length = 435
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 20 QITKLKIDSNPFAKGFRDSSRLTEFERETME 50
+IT LKI NPFAK F D+ ++ +E ME
Sbjct: 202 EITALKIKYNPFAKAFLDAKERSD-HKEMME 231
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.326 0.135 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,802,389
Number of Sequences: 224733
Number of extensions: 477227
Number of successful extensions: 1588
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1528
Number of HSP's gapped (non-prelim): 69
length of query: 170
length of database: 73,234,838
effective HSP length: 85
effective length of query: 85
effective length of database: 54,132,533
effective search space: 4601265305
effective search space used: 4601265305
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 62 (29.1 bits)
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